RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 EML3Q32P44 896 aa19.46■□□□□ 0.71
HOXD11-202ENST00000498438 PPP1R26Q5T8A7 1209 aaPredicted RBP19.46■□□□□ 0.71
HOXD11-202ENST00000498438 GPRIN1Q7Z2K8 1008 aa19.46■□□□□ 0.71
HOXD11-202ENST00000498438 CPA6Q8N4T0 437 aa19.46■□□□□ 0.71
HOXD11-202ENST00000498438 SLC4A11Q8NBS3 891 aa19.46■□□□□ 0.71
HOXD11-202ENST00000498438 IER2Q9BTL4 223 aa19.46■□□□□ 0.71
HOXD11-202ENST00000498438 PRMT8Q9NR22 394 aaPredicted RBP19.46■□□□□ 0.71
HOXD11-202ENST00000498438 CHORDC1Q9UHD1 332 aaPredicted RBP19.46■□□□□ 0.71
HOXD11-202ENST00000498438 FBXO4Q9UKT5 387 aa19.46■□□□□ 0.71
HOXD11-202ENST00000498438 R4GN57 208 aa19.46■□□□□ 0.71
HOXD11-202ENST00000498438 HHLA1C9JL84 531 aa19.45■□□□□ 0.7
HOXD11-202ENST00000498438 ZDHHC11BP0C7U3 371 aa19.45■□□□□ 0.7
HOXD11-202ENST00000498438 MBL2P11226 248 aaPredicted RBP19.45■□□□□ 0.7
HOXD11-202ENST00000498438 RAD23BP54727 409 aa19.45■□□□□ 0.7
HOXD11-202ENST00000498438 LRMPQ12912 555 aa19.45■□□□□ 0.7
HOXD11-202ENST00000498438 CUL2Q13617 745 aa19.45■□□□□ 0.7
HOXD11-202ENST00000498438 ZNF528Q3MIS6 628 aa19.45■□□□□ 0.7
HOXD11-202ENST00000498438 SNX30Q5VWJ9 437 aa19.45■□□□□ 0.7
HOXD11-202ENST00000498438 ATP2A3Q93084 1043 aa19.45■□□□□ 0.7
HOXD11-202ENST00000498438 NKD2Q969F2 451 aaPredicted RBP19.45■□□□□ 0.7
HOXD11-202ENST00000498438 TMEM176AQ96HP8 235 aa19.45■□□□□ 0.7
HOXD11-202ENST00000498438 HEXIM2Q96MH2 286 aaKnown RBP19.45■□□□□ 0.7
HOXD11-202ENST00000498438 FBXO44Q9H4M3 255 aa19.45■□□□□ 0.7
HOXD11-202ENST00000498438 FAM124BQ9H5Z6 455 aaPredicted RBP19.45■□□□□ 0.7
HOXD11-202ENST00000498438 ECT2Q9H8V3 914 aa19.45■□□□□ 0.7
HOXD11-202ENST00000498438 PRR23AA6NEV1 266 aa19.44■□□□□ 0.7
HOXD11-202ENST00000498438 COCHO43405 550 aa19.44■□□□□ 0.7
HOXD11-202ENST00000498438 TUBP50607 506 aa19.44■□□□□ 0.7
HOXD11-202ENST00000498438 CCINQ13939 588 aa19.44■□□□□ 0.7
HOXD11-202ENST00000498438 GAS6Q14393 721 aa19.44■□□□□ 0.7
HOXD11-202ENST00000498438 DGKKQ5KSL6 1271 aa19.44■□□□□ 0.7
HOXD11-202ENST00000498438 HECTD3Q5T447 861 aa19.44■□□□□ 0.7
HOXD11-202ENST00000498438 ZC3H14Q6PJT7 736 aaKnown RBP19.44■□□□□ 0.7
HOXD11-202ENST00000498438 Q6ZS52 159 aa19.44■□□□□ 0.7
HOXD11-202ENST00000498438 ASCL5Q7RTU5 278 aa19.44■□□□□ 0.7
HOXD11-202ENST00000498438 LINC00597Q9H2U6 94 aa19.44■□□□□ 0.7
HOXD11-202ENST00000498438 CCSER2Q9H7U1 834 aa19.44■□□□□ 0.7
HOXD11-202ENST00000498438 PNPLA8Q9NP80 782 aa19.44■□□□□ 0.7
HOXD11-202ENST00000498438 FAM186AA6NE01 2351 aa19.44■□□□□ 0.7
HOXD11-202ENST00000498438 PMM2O15305 246 aa19.43■□□□□ 0.7
HOXD11-202ENST00000498438 CYP26A1O43174 497 aa19.43■□□□□ 0.7
HOXD11-202ENST00000498438 GJA4P35212 333 aa19.43■□□□□ 0.7
HOXD11-202ENST00000498438 PGFP49763 221 aa19.43■□□□□ 0.7
HOXD11-202ENST00000498438 NAIF1Q69YI7 327 aaPredicted RBP19.43■□□□□ 0.7
HOXD11-202ENST00000498438 TSSK4Q6SA08 328 aa19.43■□□□□ 0.7
HOXD11-202ENST00000498438 TRIM59Q8IWR1 403 aa19.43■□□□□ 0.7
HOXD11-202ENST00000498438 ZFRQ96KR1 1074 aaKnown RBP19.43■□□□□ 0.7
HOXD11-202ENST00000498438 SRRTQ9BXP5 876 aaKnown RBP19.43■□□□□ 0.7
HOXD11-202ENST00000498438 DUSP16Q9BY84 665 aa19.43■□□□□ 0.7
HOXD11-202ENST00000498438 CLSTN2Q9H4D0 955 aa19.43■□□□□ 0.7
HOXD11-202ENST00000498438 CFAP97Q9P2B7 532 aa19.43■□□□□ 0.7
HOXD11-202ENST00000498438 TRDMT1O14717 391 aaKnown RBP19.42■□□□□ 0.7
HOXD11-202ENST00000498438 SCAMP3O14828 347 aaKnown RBP19.42■□□□□ 0.7
HOXD11-202ENST00000498438 NFATC1O95644 943 aa19.42■□□□□ 0.7
HOXD11-202ENST00000498438 GNA14O95837 355 aa19.42■□□□□ 0.7
HOXD11-202ENST00000498438 ACO1P21399 889 aaKnown RBP19.42■□□□□ 0.7
HOXD11-202ENST00000498438 TBXAS1P24557 533 aaPredicted RBP19.42■□□□□ 0.7
HOXD11-202ENST00000498438 MARSP56192 900 aaKnown RBP19.42■□□□□ 0.7
HOXD11-202ENST00000498438 YWHAEP62258 255 aaKnown RBP19.42■□□□□ 0.7
HOXD11-202ENST00000498438 AMPD2Q01433 879 aa19.42■□□□□ 0.7
HOXD11-202ENST00000498438 TMEM196Q5HYL7 178 aa19.42■□□□□ 0.7
HOXD11-202ENST00000498438 FSTL4Q6MZW2 842 aa19.42■□□□□ 0.7
HOXD11-202ENST00000498438 MAMSTRQ6ZN01 415 aa19.42■□□□□ 0.7
HOXD11-202ENST00000498438 DDX42Q86XP3 938 aaKnown RBP eCLIP19.42■□□□□ 0.7
HOXD11-202ENST00000498438 UBR7Q8N806 425 aa19.42■□□□□ 0.7
HOXD11-202ENST00000498438 NT5C1BQ96P26 610 aa19.42■□□□□ 0.7
HOXD11-202ENST00000498438 TLR8Q9NR97 1041 aaKnown RBP19.42■□□□□ 0.7
HOXD11-202ENST00000498438 RWDD2AQ9UIY3 292 aa19.42■□□□□ 0.7
HOXD11-202ENST00000498438 SCML2Q9UQR0 700 aa19.42■□□□□ 0.7
HOXD11-202ENST00000498438 PTPRZ1P23471 2315 aaPredicted RBP19.41■□□□□ 0.7
HOXD11-202ENST00000498438 ATG2BQ96BY7 2078 aa19.41■□□□□ 0.7
HOXD11-202ENST00000498438 P4HA2O15460 535 aa19.41■□□□□ 0.7
HOXD11-202ENST00000498438 TLR5O60602 858 aa19.41■□□□□ 0.7
HOXD11-202ENST00000498438 CCR3P51677 355 aa19.41■□□□□ 0.7
HOXD11-202ENST00000498438 KIF11P52732 1056 aa19.41■□□□□ 0.7
HOXD11-202ENST00000498438 SATB1Q01826 763 aa19.41■□□□□ 0.7
HOXD11-202ENST00000498438 CETN1Q12798 172 aa19.41■□□□□ 0.7
HOXD11-202ENST00000498438 GRSF1Q12849 480 aaKnown RBP eCLIP19.41■□□□□ 0.7
HOXD11-202ENST00000498438 ARHGAP17Q68EM7 881 aa19.41■□□□□ 0.7
HOXD11-202ENST00000498438 SYNPOQ8N3V7 929 aa19.41■□□□□ 0.7
HOXD11-202ENST00000498438 SPEM1Q8N4L4 309 aa19.41■□□□□ 0.7
HOXD11-202ENST00000498438 KIAA1958Q8N8K9 716 aa19.41■□□□□ 0.7
HOXD11-202ENST00000498438 NACA2Q9H009 215 aa19.41■□□□□ 0.7
HOXD11-202ENST00000498438 CCDC192P0DO97 292 aa19.4■□□□□ 0.7
HOXD11-202ENST00000498438 TDGF1P13385 188 aa19.4■□□□□ 0.7
HOXD11-202ENST00000498438 KCNH2Q12809 1159 aa19.4■□□□□ 0.7
HOXD11-202ENST00000498438 NR1H3Q13133 447 aa19.4■□□□□ 0.7
HOXD11-202ENST00000498438 PPP2R5DQ14738 602 aa19.4■□□□□ 0.7
HOXD11-202ENST00000498438 GOLGA7BQ2TAP0 167 aa19.4■□□□□ 0.7
HOXD11-202ENST00000498438 CLEC17AQ6ZS10 378 aa19.4■□□□□ 0.7
HOXD11-202ENST00000498438 PPM1KQ8N3J5 372 aa19.4■□□□□ 0.7
HOXD11-202ENST00000498438 LMO3Q8TAP4 145 aa19.4■□□□□ 0.7
HOXD11-202ENST00000498438 NELL1Q92832 810 aa19.4■□□□□ 0.7
HOXD11-202ENST00000498438 P2RY13Q9BPV8 354 aa19.4■□□□□ 0.7
HOXD11-202ENST00000498438 FBRSL1Q9HCM7 1045 aaKnown RBP19.4■□□□□ 0.7
HOXD11-202ENST00000498438 OSER1Q9NX31 292 aa19.4■□□□□ 0.7
HOXD11-202ENST00000498438 ZSCAN32Q9NX65 697 aa19.4■□□□□ 0.7
HOXD11-202ENST00000498438 PCDHGA2Q9Y5H1 932 aa19.4■□□□□ 0.7
HOXD11-202ENST00000498438 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.4■□□□□ 0.7
HOXD11-202ENST00000498438 MYOFQ9NZM1 2061 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms