RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	MYH9	P35579	1960 aa	Known RBP	5.74	□□□□□ -1.49
HMGXB4-208	ENST00000498325	MYH11	P35749	1972 aa		5.74	□□□□□ -1.49
HMGXB4-208	ENST00000498325	WDR81	Q562E7	1941 aa		5.74	□□□□□ -1.49
HMGXB4-208	ENST00000498325	DOCK5	Q9H7D0	1870 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	PRRC2B	Q5JSZ5	2229 aa	Known RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325		A0A1W2PQJ5	194 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	DENND3	A2RUS2	1198 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TMEM150B	A6NC51	233 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325		H0Y858	1186 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	OVOL3	O00110	214 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	DYNC1I1	O14576	645 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	KIAA0391	O15091	583 aa	Known RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	MAPK13	O15264	365 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	MAGEB2	O15479	319 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TGFB1I1	O43294	461 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ZSCAN12	O43309	604 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	EXOC3	O60645	756 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	MFAP3L	O75121	409 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	SNAI1	O95863	264 aa	Predicted RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	AFP	P02771	609 aa	Known RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TUBB4A	P04350	444 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CA3	P07451	260 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	KRT13	P13646	458 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TRIM21	P19474	475 aa	Known RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	KCNA5	P22460	613 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	IGFBP6	P24592	240 aa	Predicted RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CASP14	P31944	242 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	GBP1	P32455	592 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	HOXD13	P35453	343 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	KRT9	P35527	623 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ARL2	P36404	184 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	NAMPT	P43490	491 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ADK	P55263	362 aa	Known RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	RNF4	P78317	190 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ZBED6	P86452	979 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CCZ1B	P86790	482 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CCZ1	P86791	482 aa	Predicted RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TNFAIP2	Q03169	654 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ARHGAP1	Q07960	439 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	STRN3	Q13033	797 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TFDP1	Q14186	410 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	MXD4	Q14582	209 aa	Predicted RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	PLCB4	Q15147	1175 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TARBP2	Q15633	366 aa	Known RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	BRDT	Q58F21	947 aa	Predicted RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	MIIP	Q5JXC2	388 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	DNTTIP2	Q5QJE6	756 aa	Known RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	PRAMEF19	Q5SWL8	479 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	PSRC1	Q6PGN9	363 aa	Predicted RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	RPTN	Q6XPR3	784 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	OTOP2	Q7RTS6	562 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ANKRD33	Q7Z3H0	272 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TMC3	Q7Z5M5	1100 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	BMP8A	Q7Z5Y6	402 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	USP37	Q86T82	979 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TMTC1	Q8IUR5	882 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	C12orf56	Q8IXR9	622 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	FAM186B	Q8IYM0	893 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TC2N	Q8N9U0	490 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	XXYLT1	Q8NBI6	393 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	NEK11	Q8NG66	645 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	OR6J1	Q8NGC5	347 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	OR8K1	Q8NGG5	319 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	PPTC7	Q8NI37	304 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	DEPTOR	Q8TB45	409 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ARNTL2	Q8WYA1	636 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	COPS5	Q92905	334 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	PCYT2	Q99447	389 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	SPATA25	Q9BR10	227 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	POLR3F	Q9H1D9	316 aa	Predicted RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TMX1	Q9H3N1	280 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	MMRN2	Q9H8L6	949 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	KIAA1586	Q9HCI6	787 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TNFRSF12A	Q9NP84	129 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	GPRC5C	Q9NQ84	441 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TLR9	Q9NR96	1032 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	DMAC2	Q9NW81	257 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	SMPD4	Q9NXE4	827 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	MUTYH	Q9UIF7	546 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ZHX1	Q9UKY1	873 aa	Predicted RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ZNF215	Q9UL58	517 aa	Predicted RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	PYCARD	Q9ULZ3	195 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CAPN11	Q9UMQ6	739 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TBX20	Q9UMR3	447 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TLR6	Q9Y2C9	796 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	GPR55	Q9Y2T6	319 aa	Predicted RBP	5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TELO2	Q9Y4R8	837 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ZNF236	Q9UL36	1845 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ATRX	P46100	2492 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	CHD6	Q8TD26	2715 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	PLXNA3	P51805	1871 aa		5.73	□□□□□ -1.49
HMGXB4-208	ENST00000498325	ARID2	Q68CP9	1835 aa		5.72	□□□□□ -1.49
HMGXB4-208	ENST00000498325	COL1A2	P08123	1366 aa		5.72	□□□□□ -1.49
HMGXB4-208	ENST00000498325		A0A1W2PQ45	241 aa	Predicted RBP	5.72	□□□□□ -1.49
HMGXB4-208	ENST00000498325		A0A1W2PQY0	241 aa		5.72	□□□□□ -1.49
HMGXB4-208	ENST00000498325	TTC26	A0AVF1	554 aa		5.72	□□□□□ -1.49
HMGXB4-208	ENST00000498325	GTPBP10	A4D1E9	387 aa	Known RBP	5.72	□□□□□ -1.49
HMGXB4-208	ENST00000498325	GOLGA6L9	A6NEM1	432 aa		5.72	□□□□□ -1.49
HMGXB4-208	ENST00000498325	LRRIQ4	A6NIV6	560 aa		5.72	□□□□□ -1.49
HMGXB4-208	ENST00000498325		K7ERI5	159 aa		5.72	□□□□□ -1.49

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