RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 CCZ1P86791 482 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-227ENST00000498056 DLX2Q07687 328 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-227ENST00000498056 SPA17Q15506 151 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 ASTE1Q2TB18 679 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-227ENST00000498056 RAB41Q5JT25 222 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 FAM102AQ5T9C2 384 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-227ENST00000498056 OR6B2Q6IFH4 312 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 ACAD10Q6JQN1 1059 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 ALKBH5Q6P6C2 394 aaKnown RBP14.27□□□□□ -0.13
CPNE1-227ENST00000498056 MON1BQ7L1V2 547 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 RTL10Q7L3V2 364 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 PHLDB2Q86SQ0 1253 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 PHF13Q86YI8 300 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-227ENST00000498056 CCDC170Q8IYT3 715 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 HS6ST3Q8IZP7 471 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 FAM149B1Q96BN6 582 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 ZNF707Q96C28 371 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-227ENST00000498056 PIWIL1Q96J94 861 aaKnown RBP14.27□□□□□ -0.13
CPNE1-227ENST00000498056 SLITRK1Q96PX8 696 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 DESI2Q9BSY9 194 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 SLC4A5Q9BY07 1137 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 UBXN6Q9BZV1 441 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 CYLDQ9NQC7 956 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 GMIPQ9P107 970 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 UXTQ9UBK9 157 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-227ENST00000498056 STRIP2Q9ULQ0 834 aa14.27□□□□□ -0.13
CPNE1-227ENST00000498056 NCANO14594 1321 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 FBXO21O94952 628 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 NDUFA10O95299 355 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 ZBED1O96006 694 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 ABL1P00519 1130 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 FTLP02792 175 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-227ENST00000498056 HMGA1P17096 107 aaKnown RBP14.26□□□□□ -0.13
CPNE1-227ENST00000498056 MMP8P22894 467 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 GABRR2P28476 465 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 DAOAP59103 153 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 NTHL1P78549 312 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 C1QBPQ07021 282 aaKnown RBP14.26□□□□□ -0.13
CPNE1-227ENST00000498056 TAF10Q12962 218 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 CTC1Q2NKJ3 1217 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 PABPC1LQ4VXU2 614 aaKnown RBP14.26□□□□□ -0.13
CPNE1-227ENST00000498056 SYCE2Q6PIF2 218 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 TMEM184AQ6ZMB5 413 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 TOGARAM2Q6ZUX3 1019 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 PDZD4Q76G19 769 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-227ENST00000498056 GRASPQ7Z6J2 395 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-227ENST00000498056 DNAJB7Q7Z6W7 309 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-227ENST00000498056 TMC8Q8IU68 726 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 ACRBPQ8NEB7 543 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 CMASQ8NFW8 434 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-227ENST00000498056 NDRG1Q92597 394 aaKnown RBP14.26□□□□□ -0.13
CPNE1-227ENST00000498056 GOLGA1Q92805 767 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 C18orf8Q96DM3 657 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 TRIM11Q96F44 468 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 TRMT2BQ96GJ1 504 aaKnown RBP14.26□□□□□ -0.13
CPNE1-227ENST00000498056 TTLL2Q9BWV7 592 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 CNGB3Q9NQW8 809 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 METTL5Q9NRN9 209 aaKnown RBP14.26□□□□□ -0.13
CPNE1-227ENST00000498056 CLEC1BQ9P126 229 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 CDH22Q9UJ99 828 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 NENFQ9UMX5 172 aa14.26□□□□□ -0.13
CPNE1-227ENST00000498056 EIF3CLB5ME19 914 aaKnown RBP14.25□□□□□ -0.13
CPNE1-227ENST00000498056 H3BQ06 376 aaPredicted RBP14.25□□□□□ -0.13
CPNE1-227ENST00000498056 ZNF263O14978 683 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 ARHGAP6O43182 974 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 PAPSS1O43252 624 aaPredicted RBP14.25□□□□□ -0.13
CPNE1-227ENST00000498056 SART1O43290 800 aaKnown RBP14.25□□□□□ -0.13
CPNE1-227ENST00000498056 TADA3O75528 432 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 GABBR2O75899 941 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 RHOP08100 348 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 POU2F2P09086 479 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 GZMAP12544 262 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 HOXB8P17481 243 aaPredicted RBP14.25□□□□□ -0.13
CPNE1-227ENST00000498056 PTPN2P17706 415 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 KCNA5P22460 613 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 CYP4F8P98187 520 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 CES5AQ6NT32 575 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 DNAJC24Q6P3W2 148 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 OLFML1Q6UWY5 402 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 TMEM110Q86TL2 294 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 XYLT1Q86Y38 959 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 SCUBE3Q8IX30 993 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 MCOLN2Q8IZK6 566 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 PDZD8Q8NEN9 1154 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 MAFAQ8NHW3 353 aaPredicted RBP14.25□□□□□ -0.13
CPNE1-227ENST00000498056 CTNNBL1Q8WYA6 563 aaPredicted RBP14.25□□□□□ -0.13
CPNE1-227ENST00000498056 ZNF830Q96NB3 372 aaPredicted RBP14.25□□□□□ -0.13
CPNE1-227ENST00000498056 EIF3CQ99613 913 aaKnown RBP14.25□□□□□ -0.13
CPNE1-227ENST00000498056 PACSIN1Q9BY11 444 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 KCNF1Q9H3M0 494 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 UBE2ZQ9H832 354 aaPredicted RBP14.25□□□□□ -0.13
CPNE1-227ENST00000498056 LUC7LQ9NQ29 371 aaKnown RBP14.25□□□□□ -0.13
CPNE1-227ENST00000498056 COMMD8Q9NX08 183 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 MYO1AQ9UBC5 1043 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 CNOT8Q9UFF9 292 aaKnown RBP14.25□□□□□ -0.13
CPNE1-227ENST00000498056 SCML2Q9UQR0 700 aa14.25□□□□□ -0.13
CPNE1-227ENST00000498056 KIF26AQ9ULI4 1882 aaPredicted RBP14.25□□□□□ -0.13
CPNE1-227ENST00000498056 CLUHO75153 1309 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 A0A1W2PQH9 124 aa14.24□□□□□ -0.13
CPNE1-227ENST00000498056 A0A1W2PRU2 124 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms