RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 DAPK3O43293 454 aa18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 PRPSAP2O60256 369 aa18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 TYMPP19971 482 aa18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 SCNN1AP37088 669 aa18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 PTGIRP43119 386 aa18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 TKTL1P51854 596 aa18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 COPS2P61201 443 aa18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 CASP8Q14790 479 aa18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 FAM171BQ6P995 826 aa18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 CYP4V2Q6ZWL3 525 aaPredicted RBP18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 SND1Q7KZF4 910 aaKnown RBP eCLIP18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 HDXQ7Z353 690 aa18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 THEM5Q8N1Q8 247 aa18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 PKMYT1Q99640 499 aa18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 DCLK3Q9C098 648 aa18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 RASAL2Q9UJF2 1139 aa18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 TBX21Q9UL17 535 aa18.64■□□□□ 0.57
CHRNA4-206ENST00000498043 PTPRDP23468 1912 aa18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 FNDC1Q4ZHG4 1894 aaPredicted RBP18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 FAM187AA6NFU0 413 aa18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 BHMG1C9JSJ3 638 aaPredicted RBP18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 CD48P09326 243 aa18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 HSPA8P11142 646 aaKnown RBP18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 DESP17661 470 aa18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 BDNFP23560 247 aa18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 TSPY1Q01534 308 aa18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 SCYL2Q6P3W7 929 aa18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 LRRTM3Q86VH5 581 aa18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 NPAS4Q8IUM7 802 aa18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 ZBTB9Q96C00 473 aa18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 ARMC5Q96C12 935 aa18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 ADAM33Q9BZ11 813 aa18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 VWA8A3KMH1 1905 aa18.63■□□□□ 0.57
CHRNA4-206ENST00000498043 SPDYE4A6NLX3 237 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 TADA2AO75478 443 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 CAPN15O75808 1086 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 TJP3O95049 919 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 OR4Q2P0C623 313 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 FAM153BP0C7A2 387 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 KDELR1P24390 212 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 ECHS1P30084 290 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 PTPN7P35236 360 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 C1QTNF8P60827 252 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 MRPS5P82675 430 aaKnown RBP18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 CUL1Q13616 776 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 FAM153CQ494X1 144 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 C1orf53Q5VUE5 145 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 KCTD6Q8NC69 237 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 HAUS1Q96CS2 278 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 CCDC114Q96M63 670 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 ULBP1Q9BZM6 244 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 TMEM39AQ9NV64 488 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 FAM153AQ9UHL3 310 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 TBKBP1A7MCY6 615 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 NRP1O14786 923 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 HSF2BPO75031 334 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 PARNO95453 639 aaKnown RBP18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 ECEL1O95672 775 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 PBX3P40426 434 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 PTPN9P43378 593 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 GJA8P48165 433 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 HDAC4P56524 1084 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 DYNLT1P63172 113 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 EFHC1Q5JVL4 640 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 EMBQ6PCB8 327 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 CRIPAKQ8N1N5 446 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 DNAJC5GQ8N7S2 189 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 RUNDC3BQ96NL0 473 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 ERP44Q9BS26 406 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 CALN1Q9BXU9 219 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 NEUROG2Q9H2A3 272 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 ADAM28Q9UKQ2 775 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 PATJQ8NI35 1801 aa18.62■□□□□ 0.57
CHRNA4-206ENST00000498043 MAP2K7O14733 419 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 HOXA2O43364 376 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 ATP8B1O43520 1251 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 ATXN1P54253 815 aaKnown RBP18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 SEC14L1Q92503 715 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 PAWRQ96IZ0 340 aaKnown RBP18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 GPATCH2LQ9NWQ4 482 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 PCDH10Q9P2E7 1040 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 HHLA1C9JL84 531 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 TRAPPC3O43617 180 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 DAB1O75553 588 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 UPP2O95045 317 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 CLTBP09497 229 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 SLC11A1P49279 550 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 LBX1P52954 281 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 LRRC26Q2I0M4 334 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 DUPD1Q68J44 220 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 ARCQ7LC44 396 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 DEFB106AQ8N104 65 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 CMASQ8NFW8 434 aaPredicted RBP18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 B3GALT6Q96L58 329 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 TBCBQ99426 244 aa18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 C11orf84Q9BUA3 381 aaPredicted RBP18.61■□□□□ 0.57
CHRNA4-206ENST00000498043 C11orf49Q9H6J7 331 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms