RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 ARMCX6Q7L4S7 300 aa23.15■■□□□ 1.3
CLIC4-204ENST00000497755 PHTF2Q8N3S3 785 aa23.15■■□□□ 1.3
CLIC4-204ENST00000497755 PDILTQ8N807 584 aa23.15■■□□□ 1.3
CLIC4-204ENST00000497755 RDH13Q8NBN7 331 aa23.15■■□□□ 1.3
CLIC4-204ENST00000497755 SLITRK1Q96PX8 696 aa23.15■■□□□ 1.3
CLIC4-204ENST00000497755 B3GNT5Q9BYG0 378 aa23.15■■□□□ 1.3
CLIC4-204ENST00000497755 TBC1D14Q9P2M4 693 aa23.15■■□□□ 1.3
CLIC4-204ENST00000497755 MORC2Q9Y6X9 1032 aaPredicted RBP23.15■■□□□ 1.3
CLIC4-204ENST00000497755 DMXL2Q8TDJ6 3036 aa23.14■■□□□ 1.3
CLIC4-204ENST00000497755 PLXND1Q9Y4D7 1925 aa23.14■■□□□ 1.3
CLIC4-204ENST00000497755 E2F8A0AVK6 867 aa23.14■■□□□ 1.29
CLIC4-204ENST00000497755 CLDN5O00501 218 aa23.14■■□□□ 1.29
CLIC4-204ENST00000497755 DLATP10515 647 aaKnown RBP23.14■■□□□ 1.29
CLIC4-204ENST00000497755 PDCP20941 246 aa23.14■■□□□ 1.29
CLIC4-204ENST00000497755 KDSRQ06136 332 aa23.14■■□□□ 1.29
CLIC4-204ENST00000497755 WDR72Q3MJ13 1102 aa23.14■■□□□ 1.29
CLIC4-204ENST00000497755 LY6G5CQ5SRR4 150 aa23.14■■□□□ 1.29
CLIC4-204ENST00000497755 STXBP4Q6ZWJ1 553 aa23.14■■□□□ 1.29
CLIC4-204ENST00000497755 DDX42Q86XP3 938 aaKnown RBP eCLIP23.14■■□□□ 1.29
CLIC4-204ENST00000497755 NUP93Q8N1F7 819 aa23.14■■□□□ 1.29
CLIC4-204ENST00000497755 HMGB4Q8WW32 186 aa23.14■■□□□ 1.29
CLIC4-204ENST00000497755 GATA6Q92908 595 aa23.14■■□□□ 1.29
CLIC4-204ENST00000497755 ZFRQ96KR1 1074 aaKnown RBP23.14■■□□□ 1.29
CLIC4-204ENST00000497755 SPACA7Q96KW9 195 aa23.14■■□□□ 1.29
CLIC4-204ENST00000497755 USP28Q96RU2 1077 aa23.14■■□□□ 1.29
CLIC4-204ENST00000497755 NUSAP1Q9BXS6 441 aaKnown RBP23.14■■□□□ 1.29
CLIC4-204ENST00000497755 ELOVL4Q9GZR5 314 aa23.14■■□□□ 1.29
CLIC4-204ENST00000497755 BCCIPQ9P287 314 aaKnown RBP eCLIP23.14■■□□□ 1.29
CLIC4-204ENST00000497755 PKD1L2Q7Z442 2459 aa23.13■■□□□ 1.29
CLIC4-204ENST00000497755 TGFB1I1O43294 461 aa23.13■■□□□ 1.29
CLIC4-204ENST00000497755 COCHO43405 550 aa23.13■■□□□ 1.29
CLIC4-204ENST00000497755 ENGP17813 658 aa23.13■■□□□ 1.29
CLIC4-204ENST00000497755 TNNI1P19237 187 aa23.13■■□□□ 1.29
CLIC4-204ENST00000497755 YWHAQP27348 245 aa23.13■■□□□ 1.29
CLIC4-204ENST00000497755 MAPK8P45983 427 aa23.13■■□□□ 1.29
CLIC4-204ENST00000497755 IFRD2Q12894 506 aaPredicted RBP23.13■■□□□ 1.29
CLIC4-204ENST00000497755 SNRNP35Q16560 246 aaKnown RBP23.13■■□□□ 1.29
CLIC4-204ENST00000497755 SPDYCQ5MJ68 293 aa23.13■■□□□ 1.29
CLIC4-204ENST00000497755 SLC23A3Q6PIS1 610 aa23.13■■□□□ 1.29
CLIC4-204ENST00000497755 EPM2AIP1Q7L775 607 aaPredicted RBP23.13■■□□□ 1.29
CLIC4-204ENST00000497755 ZNF507Q8TCN5 953 aa23.13■■□□□ 1.29
CLIC4-204ENST00000497755 ZNF516Q92618 1163 aa23.13■■□□□ 1.29
CLIC4-204ENST00000497755 CHORDC1Q9UHD1 332 aaPredicted RBP23.13■■□□□ 1.29
CLIC4-204ENST00000497755 PILRBQ9UKJ0 227 aa23.13■■□□□ 1.29
CLIC4-204ENST00000497755 BAHCC1Q9P281 2608 aa23.13■■□□□ 1.29
CLIC4-204ENST00000497755 TCRBV21S2A2A0A5A6 115 aa23.12■■□□□ 1.29
CLIC4-204ENST00000497755 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.12■■□□□ 1.29
CLIC4-204ENST00000497755 SYT1P21579 422 aa23.12■■□□□ 1.29
CLIC4-204ENST00000497755 ITPKAP23677 461 aa23.12■■□□□ 1.29
CLIC4-204ENST00000497755 GAD2Q05329 585 aa23.12■■□□□ 1.29
CLIC4-204ENST00000497755 BYSLQ13895 437 aaKnown RBP23.12■■□□□ 1.29
CLIC4-204ENST00000497755 PSMD6Q15008 389 aa23.12■■□□□ 1.29
CLIC4-204ENST00000497755 ETFBKMTQ8IXQ9 262 aa23.12■■□□□ 1.29
CLIC4-204ENST00000497755 PGBD3Q8N328 593 aa23.12■■□□□ 1.29
CLIC4-204ENST00000497755 NAT16Q8N8M0 369 aa23.12■■□□□ 1.29
CLIC4-204ENST00000497755 CCDC127Q96BQ5 260 aa23.12■■□□□ 1.29
CLIC4-204ENST00000497755 KCNK16Q96T55 309 aa23.12■■□□□ 1.29
CLIC4-204ENST00000497755 AGPAT3Q9NRZ7 376 aa23.12■■□□□ 1.29
CLIC4-204ENST00000497755 KBTBD4Q9NVX7 518 aa23.12■■□□□ 1.29
CLIC4-204ENST00000497755 CEP192Q8TEP8 1941 aa23.12■■□□□ 1.29
CLIC4-204ENST00000497755 TBC1D3BA6NDS4 549 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 A8MXQ7 604 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 TNNC1P63316 161 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 CYP24A1Q07973 514 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 SNX30Q5VWJ9 437 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 PEAR1Q5VY43 1037 aaPredicted RBP23.11■■□□□ 1.29
CLIC4-204ENST00000497755 LYSMD4Q5XG99 296 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 PIP4P1Q86T03 277 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 B3GALNT2Q8NCR0 500 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 PDZD8Q8NEN9 1154 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 SCAMP5Q8TAC9 235 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 KCNV2Q8TDN2 545 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 OVCA2Q8WZ82 227 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 FBXO32Q969P5 355 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 OTUB2Q96DC9 234 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 CGRRF1Q99675 332 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 TRIM9Q9C026 710 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 GZF1Q9H116 711 aaPredicted RBP23.11■■□□□ 1.29
CLIC4-204ENST00000497755 TNMDQ9H2S6 317 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 UPF2Q9HAU5 1272 aaKnown RBP23.11■■□□□ 1.29
CLIC4-204ENST00000497755 HCN2Q9UL51 889 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 ADAMTS9Q9P2N4 1935 aa23.11■■□□□ 1.29
CLIC4-204ENST00000497755 TMEM8BA6NDV4 472 aa23.1■■□□□ 1.29
CLIC4-204ENST00000497755 CLIC2O15247 247 aa23.1■■□□□ 1.29
CLIC4-204ENST00000497755 EIF3DO15371 548 aaKnown RBP eCLIP23.1■■□□□ 1.29
CLIC4-204ENST00000497755 RTN3O95197 1032 aaPredicted RBP23.1■■□□□ 1.29
CLIC4-204ENST00000497755 STAU1O95793 577 aaKnown RBP23.1■■□□□ 1.29
CLIC4-204ENST00000497755 MYL6P60660 151 aa23.1■■□□□ 1.29
CLIC4-204ENST00000497755 SEMA3BQ13214 749 aa23.1■■□□□ 1.29
CLIC4-204ENST00000497755 E2F4Q16254 413 aa23.1■■□□□ 1.29
CLIC4-204ENST00000497755 HECTD3Q5T447 861 aa23.1■■□□□ 1.29
CLIC4-204ENST00000497755 PAQR9Q6ZVX9 377 aa23.1■■□□□ 1.29
CLIC4-204ENST00000497755 TMEM25Q86YD3 366 aa23.1■■□□□ 1.29
CLIC4-204ENST00000497755 XYLT2Q9H1B5 865 aa23.1■■□□□ 1.29
CLIC4-204ENST00000497755 SLC32A1Q9H598 525 aa23.1■■□□□ 1.29
CLIC4-204ENST00000497755 IL37Q9NZH6 218 aa23.1■■□□□ 1.29
CLIC4-204ENST00000497755 NXF1Q9UBU9 619 aaKnown RBP23.1■■□□□ 1.29
CLIC4-204ENST00000497755 ATXN2Q99700 1313 aaKnown RBP23.09■■□□□ 1.29
CLIC4-204ENST00000497755 HOXC11O43248 304 aaPredicted RBP23.09■■□□□ 1.29
CLIC4-204ENST00000497755 TULP3O75386 442 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms