RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 FAM170BA6NMN3 283 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 AFPP02771 609 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 TPM2P07951 284 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 ZDHHC11BP0C7U3 371 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 TCF3P15923 654 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 ACO1P21399 889 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 TARSP26639 723 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 PGFP49763 221 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 TNK2Q07912 1038 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 IFRD2Q12894 506 aaPredicted RBP16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 ZNF77Q15935 545 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 ARHGAP17Q68EM7 881 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 ZNF852Q6ZMS4 543 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 GPRIN1Q7Z2K8 1008 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 DTWD2Q8NBA8 298 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 EHBP1Q8NDI1 1231 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 OVCA2Q8WZ82 227 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 FBXO32Q969P5 355 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 SLITRK1Q96PX8 696 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 NELL2Q99435 816 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 DUSP16Q9BY84 665 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 HPS4Q9NQG7 708 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 THG1LQ9NWX6 298 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 GTSE1Q9NYZ3 720 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 IFNKQ9P0W0 207 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 ARHGAP26Q9UNA1 814 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 PIAS3Q9Y6X2 628 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 CACNA1HO95180 2353 aa16.88■□□□□ 0.29
CTDSP1-214ENST00000497677 OTOL1A6NHN0 477 aaPredicted RBP16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 CKMP06732 381 aa16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 ATP1A3P13637 1013 aa16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 PRKCSHP14314 528 aaPredicted RBP16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 TRIM21P19474 475 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 TBXAS1P24557 533 aaPredicted RBP16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 SLC7A9P82251 487 aa16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 NHLH1Q02575 133 aa16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 USP4Q13107 963 aa16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 UBXN2BQ14CS0 331 aa16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 SH3RF2Q8TEC5 729 aa16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 KAT5Q92993 513 aa16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 CLDN23Q96B33 292 aa16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 CNOT6LQ96LI5 555 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 NT5C1BQ96P26 610 aa16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 PNPLA8Q9NP80 782 aa16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 SAMSN1Q9NSI8 373 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 LIMA1Q9UHB6 759 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 PTPRDP23468 1912 aa16.87■□□□□ 0.29
CTDSP1-214ENST00000497677 RNF225M0QZC1 329 aaPredicted RBP16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 MAN2B1O00754 1011 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 RFX1P22670 979 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 PLA2G5P39877 138 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 SOX9P48436 509 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 PDE6CP51160 858 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 PTPN5P54829 565 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 GSDMDP57764 484 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 CETN1Q12798 172 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 TCP11X2Q5H9J9 407 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 TRIM68Q6AZZ1 485 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 ARHGEF19Q8IW93 802 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 PDZD8Q8NEN9 1154 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 TTC8Q8TAM2 541 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 CSGALNACT1Q8TDX6 532 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 FAM3CQ92520 227 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 XPO4Q9C0E2 1151 aaKnown RBP16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 C8orf33Q9H7E9 229 aaPredicted RBP16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 GMIPQ9P107 970 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 KMT2EQ8IZD2 1858 aa16.86■□□□□ 0.29
CTDSP1-214ENST00000497677 A0A1B0GTH6 734 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 KCNJ18B7U540 433 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 H0Y858 1186 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 COCHO43405 550 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 ABL1P00519 1130 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 ARSAP15289 507 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 CTHP32929 405 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 KIF11P52732 1056 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 YWHAEP62258 255 aaKnown RBP16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 GCNT1Q02742 428 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 RUNX3Q13761 415 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 KCNJ12Q14500 433 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 MTF1Q14872 753 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 TXNDC11Q6PKC3 985 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 RRAGAQ7L523 313 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 TTC30AQ86WT1 665 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 PPM1KQ8N3J5 372 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 ANKRD52Q8NB46 1076 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 CHFRQ96EP1 664 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 KREMEN1Q96MU8 473 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 UBXN6Q9BZV1 441 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 DNAI2Q9GZS0 605 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 LINC00597Q9H2U6 94 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 FBXO44Q9H4M3 255 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 EBF3Q9H4W6 596 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 SCML2Q9UQR0 700 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 MRPS17Q9Y2R5 130 aaKnown RBP16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 USP3Q9Y6I4 520 aa16.85■□□□□ 0.29
CTDSP1-214ENST00000497677 SPECC1L-ADORA2AF8WAN1 911 aa16.84■□□□□ 0.29
CTDSP1-214ENST00000497677 LEFTY2O00292 366 aa16.84■□□□□ 0.29
CTDSP1-214ENST00000497677 RPS9P46781 194 aaKnown RBP16.84■□□□□ 0.29
CTDSP1-214ENST00000497677 TUBP50607 506 aa16.84■□□□□ 0.29
CTDSP1-214ENST00000497677 KPNA1P52294 538 aaPredicted RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms