RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 CUL4BQ13620 913 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 SNRNP35Q16560 246 aaKnown RBP16.17■□□□□ 0.18
TNRC18-210ENST00000497663 DUOXA2Q1HG44 320 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 GAB4Q2WGN9 574 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 MDH1BQ5I0G3 518 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 FAM26FQ5R3K3 315 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 SH3RF2Q8TEC5 729 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 CCDC97Q96F63 343 aaPredicted RBP16.17■□□□□ 0.18
TNRC18-210ENST00000497663 PCED1BQ96HM7 432 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 ANKRD36BP1Q96IX9 119 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 HHIPQ96QV1 700 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 C7orf25Q9BPX7 421 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 RNF38Q9H0F5 515 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 ECT2Q9H8V3 914 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 SLC39A2Q9NP94 309 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 ATP13A2Q9NQ11 1180 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 SEMA4GQ9NTN9 838 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 ACACBO00763 2458 aa16.17■□□□□ 0.18
TNRC18-210ENST00000497663 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.16■□□□□ 0.18
TNRC18-210ENST00000497663 DCLK1O15075 740 aa16.16■□□□□ 0.18
TNRC18-210ENST00000497663 POLR2DO15514 142 aaKnown RBP16.16■□□□□ 0.18
TNRC18-210ENST00000497663 TNNC2P02585 160 aa16.16■□□□□ 0.18
TNRC18-210ENST00000497663 DDX6P26196 483 aaKnown RBP eCLIP16.16■□□□□ 0.18
TNRC18-210ENST00000497663 CYP27A1Q02318 531 aa16.16■□□□□ 0.18
TNRC18-210ENST00000497663 FAM160A1Q05DH4 1040 aa16.16■□□□□ 0.18
TNRC18-210ENST00000497663 ZNF268Q14587 947 aaPredicted RBP16.16■□□□□ 0.18
TNRC18-210ENST00000497663 CYP2U1Q7Z449 544 aa16.16■□□□□ 0.18
TNRC18-210ENST00000497663 KBTBD6Q86V97 674 aa16.16■□□□□ 0.18
TNRC18-210ENST00000497663 WDR5BQ86VZ2 330 aa16.16■□□□□ 0.18
TNRC18-210ENST00000497663 WDR49Q8IV35 697 aa16.16■□□□□ 0.18
TNRC18-210ENST00000497663 LINC00528Q8N1L1 170 aa16.16■□□□□ 0.18
TNRC18-210ENST00000497663 OSCP1Q8WVF1 389 aa16.16■□□□□ 0.18
TNRC18-210ENST00000497663 MMS19Q96T76 1030 aa16.16■□□□□ 0.18
TNRC18-210ENST00000497663 ZNF518BQ9C0D4 1074 aa16.16■□□□□ 0.18
TNRC18-210ENST00000497663 XYLT2Q9H1B5 865 aa16.16■□□□□ 0.18
TNRC18-210ENST00000497663 DUS2Q9NX74 493 aaKnown RBP16.16■□□□□ 0.18
TNRC18-210ENST00000497663 PCDHA7Q9UN72 937 aa16.16■□□□□ 0.18
TNRC18-210ENST00000497663 ANAPC1Q9H1A4 1944 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 F8VP50 259 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 EIF3DO15371 548 aaKnown RBP eCLIP16.15■□□□□ 0.18
TNRC18-210ENST00000497663 CUTAO60888 179 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 CKMP06732 381 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 PCSK1P29120 753 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 MAGEA11P43364 429 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 AFMP43652 599 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 RAP1GAPP47736 663 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 CDH8P55286 799 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 MYL6P60660 151 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 LMNB2Q03252 620 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 GRSF1Q12849 480 aaKnown RBP eCLIP16.15■□□□□ 0.18
TNRC18-210ENST00000497663 NCOA4Q13772 614 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 PPP2R5DQ14738 602 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 PSMD6Q15008 389 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 SF3A2Q15428 464 aaKnown RBP16.15■□□□□ 0.18
TNRC18-210ENST00000497663 CNNM4Q6P4Q7 775 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 C1orf228Q6PIY5 440 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 DEPDC4Q8N2C3 294 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 SYNPOQ8N3V7 929 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 FUBP3Q96I24 572 aaKnown RBP eCLIP16.15■□□□□ 0.18
TNRC18-210ENST00000497663 CGRRF1Q99675 332 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 P2RY13Q9BPV8 354 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 B3GNT5Q9BYG0 378 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 SDCBP2Q9H190 292 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 MAGEC2Q9UBF1 373 aaPredicted RBP16.15■□□□□ 0.18
TNRC18-210ENST00000497663 CDH9Q9ULB4 789 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 RAB23Q9ULC3 237 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 CNOT1A5YKK6 2376 aaKnown RBP16.15■□□□□ 0.18
TNRC18-210ENST00000497663 GREB1Q4ZG55 1949 aa16.15■□□□□ 0.18
TNRC18-210ENST00000497663 ZNF638Q14966 1978 aaKnown RBP16.15■□□□□ 0.18
TNRC18-210ENST00000497663 TRAV19A0A0A6YYK7 116 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 KLRC4O43908 158 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 YEATS4O95619 227 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 HDCP19113 662 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 HOXA6P31267 233 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 GNL1P36915 607 aaPredicted RBP16.14■□□□□ 0.17
TNRC18-210ENST00000497663 GRIK1P39086 918 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 PGFP49763 221 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 MYO1EQ12965 1108 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 PDGFRLQ15198 375 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 CC2D1AQ6P1N0 951 aaPredicted RBP16.14■□□□□ 0.17
TNRC18-210ENST00000497663 PRR23CQ6ZRP0 262 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 UNC13DQ70J99 1090 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 CEP68Q76N32 757 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 DPH6Q7L8W6 267 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.14■□□□□ 0.17
TNRC18-210ENST00000497663 RPLP0P6Q8NHW5 317 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 MYCBPAPQ8TBZ2 947 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 SECISBP2LQ93073 1101 aaKnown RBP16.14■□□□□ 0.17
TNRC18-210ENST00000497663 ARRDC1-AS1Q9H2J1 176 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 SMYD3Q9H7B4 428 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 KIF9Q9HAQ2 790 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 DACH1Q9UI36 760 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 INVSQ9Y283 1065 aa16.14■□□□□ 0.17
TNRC18-210ENST00000497663 PTPRDP23468 1912 aa16.13■□□□□ 0.17
TNRC18-210ENST00000497663 ZNF840PA6NDX5 716 aa16.13■□□□□ 0.17
TNRC18-210ENST00000497663 LEFTY2O00292 366 aa16.13■□□□□ 0.17
TNRC18-210ENST00000497663 USP17L7P0C7H9 530 aa16.13■□□□□ 0.17
TNRC18-210ENST00000497663 HNRNPLP14866 589 aaKnown RBP eCLIP16.13■□□□□ 0.17
TNRC18-210ENST00000497663 TNNI1P19237 187 aa16.13■□□□□ 0.17
TNRC18-210ENST00000497663 OPRD1P41143 372 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms