RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 CATSPER4Q7RTX7 472 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 GRK7Q8WTQ7 553 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 CENPTQ96BT3 561 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 KIF12Q96FN5 646 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 TWNKQ96RR1 684 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 DCLK3Q9C098 648 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 MIS12Q9H081 205 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 FGFR1OP2Q9NVK5 253 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 WHRNQ9P202 907 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 CYTH4Q9UIA0 394 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 DOCK3Q8IZD9 2030 aa12.11□□□□□ -0.47
SNRNP200-208ENST00000497539 MICAL2O94851 1124 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 NUDT17P0C025 328 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 CYBAP13498 195 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 YARSP54577 528 aaKnown RBP12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 CUL3Q13618 768 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 FSCN1Q16658 493 aaKnown RBP12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 UBXN11Q5T124 520 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 TAF2Q6P1X5 1199 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 UNC93AQ86WB7 457 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 XYLT1Q86Y38 959 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 ANKRD42Q8N9B4 389 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 BEST2Q8NFU1 509 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 DYDC1Q8WWB3 177 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 ART4Q93070 314 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 PGM2Q96G03 612 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 TCP11X1B4DZS4 312 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 GPD2P43304 727 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 RPL7AP62424 266 aaKnown RBP12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 OGDHQ02218 1023 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 SLMAPQ14BN4 828 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 PKDCCQ504Y2 493 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 TTC30AQ86WT1 665 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 GDAP1Q8TB36 358 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 PPP1R16BQ96T49 567 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 DDX23Q9BUQ8 820 aaKnown RBP12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 FRMD8P1Q9BZ68 369 aaPredicted RBP12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 CDHR5Q9HBB8 845 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 HMGXB4Q9UGU5 601 aa12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 UBQLN1Q9UMX0 589 aaKnown RBP12.1□□□□□ -0.47
SNRNP200-208ENST00000497539 PIRO00625 290 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 RASGRF2O14827 1237 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 ACSL3O95573 720 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 CD4P01730 458 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 CDH8P55286 799 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 AUHQ13825 339 aaKnown RBP12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 BTG3Q14201 252 aaPredicted RBP12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 C2CD6Q53TS8 623 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 SGO2Q562F6 1265 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 ARHGAP17Q68EM7 881 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 BZW1Q7L1Q6 419 aaKnown RBP12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 P3H4Q92791 437 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 MCEEQ96PE7 176 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 SLITRK1Q96PX8 696 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 HERPUD2Q9BSE4 406 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 EIF2AQ9BY44 585 aaKnown RBP12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 ECT2Q9H8V3 914 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 GDAP2Q9NXN4 497 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 CTNNAL1Q9UBT7 734 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 PHF24Q9UPV7 400 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 N6AMT1Q9Y5N5 214 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 TNPO2O14787 897 aaKnown RBP12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 CA12O43570 354 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 DIAPH2O60879 1101 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 MYL3P08590 195 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 ATF7P17544 494 aaPredicted RBP12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 CETN2P41208 172 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 PNPLA4P41247 253 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 RPL34P49207 117 aaKnown RBP12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 CAV1Q03135 178 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 CRHR2Q13324 411 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 CCDC92Q53HC0 331 aaPredicted RBP12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 EXOC3L1Q86VI1 746 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 SESTD1Q86VW0 696 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 TRPV1Q8NER1 839 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 STK32AQ8WU08 396 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 ZMAT2Q96NC0 199 aaKnown RBP12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 OSMRQ99650 979 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 NT5C1AQ9BXI3 368 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 OSBPL8Q9BZF1 889 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 FAM49AQ9H0Q0 323 aaPredicted RBP12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 KCNK9Q9NPC2 374 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 SNTG2Q9NY99 539 aa12.09□□□□□ -0.47
SNRNP200-208ENST00000497539 DPYSL4O14531 572 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 RIPK2O43353 540 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 XPOTO43592 962 aaKnown RBP12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 CD19P15391 556 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 CYP2B6P20813 491 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 CTGFP29279 349 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 NDST1P52848 882 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 NCALDP61601 193 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 SLC25A11Q02978 314 aaKnown RBP12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 ITIH4Q14624 930 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 C6orf118Q5T5N4 469 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 C9orf57Q5W0N0 161 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 RHBDF2Q6PJF5 856 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 CCDC105Q8IYK2 499 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 CPXM1Q96SM3 734 aa12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 MTG1Q9BT17 334 aaPredicted RBP12.08□□□□□ -0.48
SNRNP200-208ENST00000497539 CYLDQ9NQC7 956 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms