RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 TBC1D30Q9Y2I9 924 aa6.51□□□□□ -1.37
MDM2-220ENST00000496959 FNDC1Q4ZHG4 1894 aaPredicted RBP6.51□□□□□ -1.37
MDM2-220ENST00000496959 CEP164Q9UPV0 1460 aa6.5□□□□□ -1.37
MDM2-220ENST00000496959 CES2O00748 559 aa6.5□□□□□ -1.37
MDM2-220ENST00000496959 MGEA5O60502 916 aa6.5□□□□□ -1.37
MDM2-220ENST00000496959 PMPCBO75439 489 aa6.5□□□□□ -1.37
MDM2-220ENST00000496959 CHRM5P08912 532 aaPredicted RBP6.5□□□□□ -1.37
MDM2-220ENST00000496959 RENBPP51606 427 aa6.5□□□□□ -1.37
MDM2-220ENST00000496959 HNRNPA0Q13151 305 aaKnown RBP6.5□□□□□ -1.37
MDM2-220ENST00000496959 POLD3Q15054 466 aaPredicted RBP6.5□□□□□ -1.37
MDM2-220ENST00000496959 PAPD7Q5XG87 772 aaKnown RBP6.5□□□□□ -1.37
MDM2-220ENST00000496959 DENND2CQ68D51 928 aa6.5□□□□□ -1.37
MDM2-220ENST00000496959 SFTPA1Q8IWL2 248 aa6.5□□□□□ -1.37
MDM2-220ENST00000496959 SCARB1Q8WTV0 552 aa6.5□□□□□ -1.37
MDM2-220ENST00000496959 SH2D3AQ9BRG2 576 aa6.5□□□□□ -1.37
MDM2-220ENST00000496959 QTRT1Q9BXR0 403 aaKnown RBP6.5□□□□□ -1.37
MDM2-220ENST00000496959 DNMT3BQ9UBC3 853 aaKnown RBP6.5□□□□□ -1.37
MDM2-220ENST00000496959 A6NNZ2 444 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 H7C4K7 107 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 M0R3H8 397 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 USP1O94782 785 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 FGAP02671 866 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 MYF5P13349 255 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 FPR3P25089 353 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 FMO1Q01740 532 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 ARHGEF7Q14155 803 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 KIAA0753Q2KHM9 967 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 GFOD2Q3B7J2 385 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 RNASE12Q5GAN4 147 aaKnown RBP6.49□□□□□ -1.37
MDM2-220ENST00000496959 C3orf38Q5JPI3 329 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 MORN5Q5VZ52 161 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 ZNF425Q6IV72 752 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 MIS18BP1Q6P0N0 1132 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 C8orf58Q8NAV2 365 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 FAM156AQ8NDB6 213 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 RPL36ALQ969Q0 106 aaKnown RBP6.49□□□□□ -1.37
MDM2-220ENST00000496959 APIPQ96GX9 242 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 RITA1Q96K30 269 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 C5orf34Q96MH7 638 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 FYTTD1Q96QD9 318 aaKnown RBP6.49□□□□□ -1.37
MDM2-220ENST00000496959 VN1R3Q9BXE9 311 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 BHMT2Q9H2M3 363 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 DHX36Q9H2U1 1008 aaKnown RBP6.49□□□□□ -1.37
MDM2-220ENST00000496959 ZNF287Q9HBT7 754 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 DDX20Q9UHI6 824 aaKnown RBP6.49□□□□□ -1.37
MDM2-220ENST00000496959 PRDM2Q13029 1718 aa6.49□□□□□ -1.37
MDM2-220ENST00000496959 MROH2BQ7Z745 1585 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 GOLIM4O00461 696 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 ADAMTS3O15072 1205 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 CD3EAPO15446 510 aaKnown RBP6.48□□□□□ -1.37
MDM2-220ENST00000496959 MAP4K4O95819 1239 aaPredicted RBP6.48□□□□□ -1.37
MDM2-220ENST00000496959 ZBED1O96006 694 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 HRGP04196 525 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 PHKG2P15735 406 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 UQCRC1P31930 480 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 PTDSS1P48651 473 aaKnown RBP6.48□□□□□ -1.37
MDM2-220ENST00000496959 ALDH5A1P51649 535 aaPredicted RBP6.48□□□□□ -1.37
MDM2-220ENST00000496959 FAM193AP78312 1265 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 SLC29A2Q14542 456 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 EPHA10Q5JZY3 1008 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 PTCHD4Q6ZW05 846 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 CHST15Q7LFX5 561 aaPredicted RBP6.48□□□□□ -1.37
MDM2-220ENST00000496959 YAF2Q8IY57 180 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 GALNT16Q8N428 558 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 ADAMTS18Q8TE60 1221 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 BTBD3Q9Y2F9 522 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 FER1L4A9Z1Z3 1794 aa6.48□□□□□ -1.37
MDM2-220ENST00000496959 VSTM5A8MXK1 200 aa6.47□□□□□ -1.37
MDM2-220ENST00000496959 TPP1O14773 563 aa6.47□□□□□ -1.37
MDM2-220ENST00000496959 RRP9O43818 475 aaKnown RBP6.47□□□□□ -1.37
MDM2-220ENST00000496959 GCATO75600 419 aa6.47□□□□□ -1.37
MDM2-220ENST00000496959 PIAS2O75928 621 aa6.47□□□□□ -1.37
MDM2-220ENST00000496959 TIRAPP58753 221 aa6.47□□□□□ -1.37
MDM2-220ENST00000496959 RPS16P62249 146 aaKnown RBP6.47□□□□□ -1.37
MDM2-220ENST00000496959 FAM187BQ17R55 369 aa6.47□□□□□ -1.37
MDM2-220ENST00000496959 C4orf46Q504U0 113 aa6.47□□□□□ -1.37
MDM2-220ENST00000496959 TMEM63BQ5T3F8 832 aa6.47□□□□□ -1.37
MDM2-220ENST00000496959 KCTD20Q7Z5Y7 419 aa6.47□□□□□ -1.37
MDM2-220ENST00000496959 IPCEF1Q8WWN9 437 aaPredicted RBP6.47□□□□□ -1.37
MDM2-220ENST00000496959 CCDC17Q96LX7 622 aa6.47□□□□□ -1.37
MDM2-220ENST00000496959 MMS19Q96T76 1030 aa6.47□□□□□ -1.37
MDM2-220ENST00000496959 SNX15Q9NRS6 342 aa6.47□□□□□ -1.37
MDM2-220ENST00000496959 COL20A1Q9P218 1284 aa6.47□□□□□ -1.37
MDM2-220ENST00000496959 FRMPD2Q68DX3 1309 aaPredicted RBP6.47□□□□□ -1.37
MDM2-220ENST00000496959 BTBD19C9JJ37 291 aa6.46□□□□□ -1.38
MDM2-220ENST00000496959 INMTO95050 263 aa6.46□□□□□ -1.38
MDM2-220ENST00000496959 TPH1P17752 444 aa6.46□□□□□ -1.38
MDM2-220ENST00000496959 ACVR2AP27037 513 aa6.46□□□□□ -1.38
MDM2-220ENST00000496959 CPT1AP50416 773 aa6.46□□□□□ -1.38
MDM2-220ENST00000496959 ITGA8P53708 1063 aa6.46□□□□□ -1.38
MDM2-220ENST00000496959 PSG6Q00889 435 aa6.46□□□□□ -1.38
MDM2-220ENST00000496959 NPY5RQ15761 445 aa6.46□□□□□ -1.38
MDM2-220ENST00000496959 ZNF750Q32MQ0 723 aa6.46□□□□□ -1.38
MDM2-220ENST00000496959 SUPT20HL1Q3ZLR7 823 aa6.46□□□□□ -1.38
MDM2-220ENST00000496959 BCDIN3DQ7Z5W3 292 aaKnown RBP6.46□□□□□ -1.38
MDM2-220ENST00000496959 CNGA4Q8IV77 575 aa6.46□□□□□ -1.38
MDM2-220ENST00000496959 DENND1AQ8TEH3 1009 aa6.46□□□□□ -1.38
MDM2-220ENST00000496959 ZBTB45Q96K62 511 aaPredicted RBP6.46□□□□□ -1.38
MDM2-220ENST00000496959 TRIM36Q9NQ86 728 aa6.46□□□□□ -1.38
MDM2-220ENST00000496959 MID2Q9UJV3 735 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms