RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 CYP3A43Q9HB55 503 aa20.68■□□□□ 0.9
COL20A1-208ENST00000496810 CSNK1G1Q9HCP0 422 aa20.68■□□□□ 0.9
COL20A1-208ENST00000496810 EHD2Q9NZN4 543 aa20.68■□□□□ 0.9
COL20A1-208ENST00000496810 CHORDC1Q9UHD1 332 aaPredicted RBP20.68■□□□□ 0.9
COL20A1-208ENST00000496810 PCDHGA2Q9Y5H1 932 aa20.68■□□□□ 0.9
COL20A1-208ENST00000496810 ANTXRLA6NF34 631 aa20.67■□□□□ 0.9
COL20A1-208ENST00000496810 HHLA1C9JL84 531 aa20.67■□□□□ 0.9
COL20A1-208ENST00000496810 K7ESF4 209 aa20.67■□□□□ 0.9
COL20A1-208ENST00000496810 SLC16A3O15427 465 aaKnown RBP20.67■□□□□ 0.9
COL20A1-208ENST00000496810 KINO60870 393 aaKnown RBP20.67■□□□□ 0.9
COL20A1-208ENST00000496810 RTN3O95197 1032 aaPredicted RBP20.67■□□□□ 0.9
COL20A1-208ENST00000496810 DGKKQ5KSL6 1271 aa20.67■□□□□ 0.9
COL20A1-208ENST00000496810 TCERG1LQ5VWI1 586 aa20.67■□□□□ 0.9
COL20A1-208ENST00000496810 MAMSTRQ6ZN01 415 aa20.67■□□□□ 0.9
COL20A1-208ENST00000496810 FILIP1Q7Z7B0 1213 aa20.67■□□□□ 0.9
COL20A1-208ENST00000496810 SPEM1Q8N4L4 309 aa20.67■□□□□ 0.9
COL20A1-208ENST00000496810 DCLK2Q8N568 766 aa20.67■□□□□ 0.9
COL20A1-208ENST00000496810 FBXL13Q8NEE6 735 aa20.67■□□□□ 0.9
COL20A1-208ENST00000496810 WBP2Q969T9 261 aa20.67■□□□□ 0.9
COL20A1-208ENST00000496810 TSG101Q99816 390 aa20.67■□□□□ 0.9
COL20A1-208ENST00000496810 NT5C1AQ9BXI3 368 aa20.67■□□□□ 0.9
COL20A1-208ENST00000496810 RAB20Q9NX57 234 aa20.67■□□□□ 0.9
COL20A1-208ENST00000496810 CFAP97Q9P2B7 532 aa20.67■□□□□ 0.9
COL20A1-208ENST00000496810 FAM92AA1XBS5 289 aa20.66■□□□□ 0.9
COL20A1-208ENST00000496810 BIN1O00499 593 aa20.66■□□□□ 0.9
COL20A1-208ENST00000496810 TRDMT1O14717 391 aaKnown RBP20.66■□□□□ 0.9
COL20A1-208ENST00000496810 ZDHHC11BP0C7U3 371 aa20.66■□□□□ 0.9
COL20A1-208ENST00000496810 FAM200BP0CF97 657 aa20.66■□□□□ 0.9
COL20A1-208ENST00000496810 MBL2P11226 248 aaPredicted RBP20.66■□□□□ 0.9
COL20A1-208ENST00000496810 CXCL12P48061 93 aa20.66■□□□□ 0.9
COL20A1-208ENST00000496810 FKBP3Q00688 224 aaKnown RBP20.66■□□□□ 0.9
COL20A1-208ENST00000496810 LRRC63Q05C16 580 aa20.66■□□□□ 0.9
COL20A1-208ENST00000496810 KLHL10Q6JEL2 608 aa20.66■□□□□ 0.9
COL20A1-208ENST00000496810 ATP2A3Q93084 1043 aa20.66■□□□□ 0.9
COL20A1-208ENST00000496810 SLC35C1Q96A29 364 aa20.66■□□□□ 0.9
COL20A1-208ENST00000496810 CYFIP2Q96F07 1278 aa20.66■□□□□ 0.9
COL20A1-208ENST00000496810 HNRNPABQ99729 332 aaKnown RBP20.66■□□□□ 0.9
COL20A1-208ENST00000496810 DUSP9Q99956 384 aaKnown RBP20.66■□□□□ 0.9
COL20A1-208ENST00000496810 SEMA4AQ9H3S1 761 aa20.66■□□□□ 0.9
COL20A1-208ENST00000496810 SPAG17Q6Q759 2223 aa20.66■□□□□ 0.9
COL20A1-208ENST00000496810 SDK1Q7Z5N4 2213 aa20.65■□□□□ 0.9
COL20A1-208ENST00000496810 PPP1R3GB7ZBB8 358 aa20.65■□□□□ 0.9
COL20A1-208ENST00000496810 CYP26A1O43174 497 aa20.65■□□□□ 0.9
COL20A1-208ENST00000496810 RNF40O75150 1001 aa20.65■□□□□ 0.9
COL20A1-208ENST00000496810 CYP17A1P05093 508 aa20.65■□□□□ 0.9
COL20A1-208ENST00000496810 PFKLP17858 780 aa20.65■□□□□ 0.9
COL20A1-208ENST00000496810 PPP3CCP48454 512 aa20.65■□□□□ 0.9
COL20A1-208ENST00000496810 PDE6CP51160 858 aa20.65■□□□□ 0.9
COL20A1-208ENST00000496810 GALK1P51570 392 aa20.65■□□□□ 0.9
COL20A1-208ENST00000496810 SRSF5Q13243 272 aaKnown RBP20.65■□□□□ 0.9
COL20A1-208ENST00000496810 PPP1R26Q5T8A7 1209 aaPredicted RBP20.65■□□□□ 0.9
COL20A1-208ENST00000496810 TTI2Q6NXR4 508 aa20.65■□□□□ 0.9
COL20A1-208ENST00000496810 ATRIPQ8WXE1 791 aa20.65■□□□□ 0.9
COL20A1-208ENST00000496810 CISHQ9NSE2 258 aa20.65■□□□□ 0.9
COL20A1-208ENST00000496810 OSER1Q9NX31 292 aa20.65■□□□□ 0.9
COL20A1-208ENST00000496810 CIZ1Q9ULV3 898 aaPredicted RBP20.65■□□□□ 0.9
COL20A1-208ENST00000496810 SMG5Q9UPR3 1016 aaKnown RBP20.65■□□□□ 0.9
COL20A1-208ENST00000496810 CTNND2Q9UQB3 1225 aa20.65■□□□□ 0.9
COL20A1-208ENST00000496810 CHURC1-FNTBB4DL54 471 aa20.64■□□□□ 0.89
COL20A1-208ENST00000496810 PSMA7O14818 248 aa20.64■□□□□ 0.89
COL20A1-208ENST00000496810 FNTBP49356 437 aa20.64■□□□□ 0.89
COL20A1-208ENST00000496810 MESP2Q0VG99 397 aa20.64■□□□□ 0.89
COL20A1-208ENST00000496810 GRSF1Q12849 480 aaKnown RBP eCLIP20.64■□□□□ 0.89
COL20A1-208ENST00000496810 MORC3Q14149 939 aa20.64■□□□□ 0.89
COL20A1-208ENST00000496810 SNX30Q5VWJ9 437 aa20.64■□□□□ 0.89
COL20A1-208ENST00000496810 HEATR6Q6AI08 1181 aaKnown RBP20.64■□□□□ 0.89
COL20A1-208ENST00000496810 SFTPA1Q8IWL2 248 aa20.64■□□□□ 0.89
COL20A1-208ENST00000496810 ELOA2Q8IYF1 753 aaPredicted RBP20.64■□□□□ 0.89
COL20A1-208ENST00000496810 SLC4A11Q8NBS3 891 aa20.64■□□□□ 0.89
COL20A1-208ENST00000496810 CCDC150Q8NCX0 1101 aa20.64■□□□□ 0.89
COL20A1-208ENST00000496810 PDZD8Q8NEN9 1154 aa20.64■□□□□ 0.89
COL20A1-208ENST00000496810 OVCA2Q8WZ82 227 aa20.64■□□□□ 0.89
COL20A1-208ENST00000496810 P2RY13Q9BPV8 354 aa20.64■□□□□ 0.89
COL20A1-208ENST00000496810 EPC1Q9H2F5 836 aa20.64■□□□□ 0.89
COL20A1-208ENST00000496810 ARMCX3Q9UH62 379 aaPredicted RBP20.64■□□□□ 0.89
COL20A1-208ENST00000496810 HOOK1Q9UJC3 728 aaKnown RBP20.64■□□□□ 0.89
COL20A1-208ENST00000496810 PAPSS2O95340 614 aaPredicted RBP20.63■□□□□ 0.89
COL20A1-208ENST00000496810 OPRD1P41143 372 aa20.63■□□□□ 0.89
COL20A1-208ENST00000496810 RAD23BP54727 409 aa20.63■□□□□ 0.89
COL20A1-208ENST00000496810 LPAL2Q16609 132 aa20.63■□□□□ 0.89
COL20A1-208ENST00000496810 HECTD3Q5T447 861 aa20.63■□□□□ 0.89
COL20A1-208ENST00000496810 C12orf40Q86WS4 652 aa20.63■□□□□ 0.89
COL20A1-208ENST00000496810 NMUR1Q9HB89 426 aa20.63■□□□□ 0.89
COL20A1-208ENST00000496810 COQ4Q9Y3A0 265 aa20.63■□□□□ 0.89
COL20A1-208ENST00000496810 TLR5O60602 858 aa20.62■□□□□ 0.89
COL20A1-208ENST00000496810 NFATC1O95644 943 aa20.62■□□□□ 0.89
COL20A1-208ENST00000496810 TBX18O95935 607 aa20.62■□□□□ 0.89
COL20A1-208ENST00000496810 IRF1P10914 325 aa20.62■□□□□ 0.89
COL20A1-208ENST00000496810 PXNP49023 591 aaPredicted RBP20.62■□□□□ 0.89
COL20A1-208ENST00000496810 LRMPQ12912 555 aa20.62■□□□□ 0.89
COL20A1-208ENST00000496810 NELFBQ8WX92 580 aa20.62■□□□□ 0.89
COL20A1-208ENST00000496810 CD101Q93033 1021 aa20.62■□□□□ 0.89
COL20A1-208ENST00000496810 DHTKD1Q96HY7 919 aaPredicted RBP20.62■□□□□ 0.89
COL20A1-208ENST00000496810 HINFPQ9BQA5 517 aa20.62■□□□□ 0.89
COL20A1-208ENST00000496810 FAM126AQ9BYI3 521 aaPredicted RBP20.62■□□□□ 0.89
COL20A1-208ENST00000496810 LAMA1P25391 3075 aa20.62■□□□□ 0.89
COL20A1-208ENST00000496810 MYO18AQ92614 2054 aaKnown RBP20.62■□□□□ 0.89
COL20A1-208ENST00000496810 MDM4O15151 490 aa20.61■□□□□ 0.89
COL20A1-208ENST00000496810 STX10O60499 249 aa20.61■□□□□ 0.89
COL20A1-208ENST00000496810 ACO1P21399 889 aaKnown RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms