RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 IPCEF1Q8WWN9 437 aaPredicted RBP6.85□□□□□ -1.31
SF3B1-212ENST00000496458 CIPCQ9C0C6 399 aa6.85□□□□□ -1.31
SF3B1-212ENST00000496458 ZNF212Q9UDV6 495 aa6.85□□□□□ -1.31
SF3B1-212ENST00000496458 AMFRQ9UKV5 643 aa6.85□□□□□ -1.31
SF3B1-212ENST00000496458 FAM50BQ9Y247 325 aa6.85□□□□□ -1.31
SF3B1-212ENST00000496458 AQP7P3A6NL99 342 aa6.84□□□□□ -1.31
SF3B1-212ENST00000496458 RHPN2P1A8MT19 583 aa6.84□□□□□ -1.31
SF3B1-212ENST00000496458 PMPCBO75439 489 aa6.84□□□□□ -1.31
SF3B1-212ENST00000496458 INMTO95050 263 aa6.84□□□□□ -1.31
SF3B1-212ENST00000496458 BTF3P20290 206 aaKnown RBP6.84□□□□□ -1.31
SF3B1-212ENST00000496458 ABCG1P45844 678 aa6.84□□□□□ -1.31
SF3B1-212ENST00000496458 PGDP52209 483 aa6.84□□□□□ -1.31
SF3B1-212ENST00000496458 PSG6Q00889 435 aa6.84□□□□□ -1.31
SF3B1-212ENST00000496458 TIAL1Q01085 375 aaKnown RBP eCLIP6.84□□□□□ -1.31
SF3B1-212ENST00000496458 KCNAB1Q14722 419 aa6.84□□□□□ -1.31
SF3B1-212ENST00000496458 RNASE12Q5GAN4 147 aaKnown RBP6.84□□□□□ -1.31
SF3B1-212ENST00000496458 RAB11FIP4Q86YS3 637 aa6.84□□□□□ -1.31
SF3B1-212ENST00000496458 PHKBQ93100 1093 aa6.84□□□□□ -1.31
SF3B1-212ENST00000496458 STRBPQ96SI9 672 aaKnown RBP6.84□□□□□ -1.31
SF3B1-212ENST00000496458 INO80BQ9C086 356 aaPredicted RBP6.84□□□□□ -1.31
SF3B1-212ENST00000496458 UNKQ9C0B0 810 aaKnown RBP6.84□□□□□ -1.31
SF3B1-212ENST00000496458 PNPLA8Q9NP80 782 aa6.84□□□□□ -1.31
SF3B1-212ENST00000496458 TBC1D23Q9NUY8 699 aa6.84□□□□□ -1.31
SF3B1-212ENST00000496458 LPAR3Q9UBY5 353 aa6.84□□□□□ -1.31
SF3B1-212ENST00000496458 FER1L4A9Z1Z3 1794 aa6.83□□□□□ -1.32
SF3B1-212ENST00000496458 AGPSO00116 658 aa6.83□□□□□ -1.32
SF3B1-212ENST00000496458 TIRAPP58753 221 aa6.83□□□□□ -1.32
SF3B1-212ENST00000496458 TUBA4AP68366 448 aa6.83□□□□□ -1.32
SF3B1-212ENST00000496458 PLAG1Q6DJT9 500 aa6.83□□□□□ -1.32
SF3B1-212ENST00000496458 ZNF66Q6ZN08 573 aa6.83□□□□□ -1.32
SF3B1-212ENST00000496458 CHSY1Q86X52 802 aa6.83□□□□□ -1.32
SF3B1-212ENST00000496458 PNLDC1Q8NA58 520 aaKnown RBP6.83□□□□□ -1.32
SF3B1-212ENST00000496458 C8orf48Q96LL4 319 aa6.83□□□□□ -1.32
SF3B1-212ENST00000496458 SNX18Q96RF0 628 aa6.83□□□□□ -1.32
SF3B1-212ENST00000496458 MMS19Q96T76 1030 aa6.83□□□□□ -1.32
SF3B1-212ENST00000496458 BRIP1Q9BX63 1249 aa6.83□□□□□ -1.32
SF3B1-212ENST00000496458 FAM83DQ9H4H8 585 aa6.83□□□□□ -1.32
SF3B1-212ENST00000496458 FLRT1Q9NZU1 646 aa6.83□□□□□ -1.32
SF3B1-212ENST00000496458 DKK4Q9UBT3 224 aa6.83□□□□□ -1.32
SF3B1-212ENST00000496458 RGS17Q9UGC6 210 aaPredicted RBP6.83□□□□□ -1.32
SF3B1-212ENST00000496458 H7C1Q1 480 aa6.82□□□□□ -1.32
SF3B1-212ENST00000496458 FGAP02671 866 aa6.82□□□□□ -1.32
SF3B1-212ENST00000496458 ANXA2P07355 339 aaKnown RBP6.82□□□□□ -1.32
SF3B1-212ENST00000496458 CELA2AP08217 269 aa6.82□□□□□ -1.32
SF3B1-212ENST00000496458 PARP1P09874 1014 aaKnown RBP6.82□□□□□ -1.32
SF3B1-212ENST00000496458 MYCLP12524 364 aaPredicted RBP6.82□□□□□ -1.32
SF3B1-212ENST00000496458 GATMP50440 423 aa6.82□□□□□ -1.32
SF3B1-212ENST00000496458 RENBPP51606 427 aa6.82□□□□□ -1.32
SF3B1-212ENST00000496458 ALDH5A1P51649 535 aaPredicted RBP6.82□□□□□ -1.32
SF3B1-212ENST00000496458 HTRA4P83105 476 aaPredicted RBP6.82□□□□□ -1.32
SF3B1-212ENST00000496458 DAG1Q14118 895 aa6.82□□□□□ -1.32
SF3B1-212ENST00000496458 SERPINA13PQ6UXR4 307 aa6.82□□□□□ -1.32
SF3B1-212ENST00000496458 PRRT4C9JH25 899 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 EXOC5O00471 708 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 KPNA5O15131 536 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 IL18RAPO95256 599 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 CYP2D6P10635 497 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 NTSR1P30989 418 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 PIK3CBP42338 1070 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 KIAA1614Q5VZ46 1190 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 PTCHD4Q6ZW05 846 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 RNF44Q7L0R7 432 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 LIX1LQ8IVB5 337 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 SFTPA1Q8IWL2 248 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 SDR16C5Q8N3Y7 309 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 VGLL2Q8N8G2 317 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 RITA1Q96K30 269 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 ZNF668Q96K58 619 aaPredicted RBP6.81□□□□□ -1.32
SF3B1-212ENST00000496458 TFCP2L1Q9NZI6 479 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 RIMKLBQ9ULI2 386 aa6.81□□□□□ -1.32
SF3B1-212ENST00000496458 M0R3H8 397 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 FOXN3O00409 490 aaPredicted RBP6.8□□□□□ -1.32
SF3B1-212ENST00000496458 SPRY2O43597 315 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 LATS1O95835 1130 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 A1BGP04217 495 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 CDK4P11802 303 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 CREB1P16220 341 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 EPHB2P29323 1055 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 MPGP29372 298 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 LMAN2Q12907 356 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 EZH2Q15910 746 aaKnown RBP6.8□□□□□ -1.32
SF3B1-212ENST00000496458 SRSF7Q16629 238 aaKnown RBP eCLIP6.8□□□□□ -1.32
SF3B1-212ENST00000496458 COBLL1Q53SF7 1204 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 RRAGBQ5VZM2 374 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 BCDIN3DQ7Z5W3 292 aaKnown RBP6.8□□□□□ -1.32
SF3B1-212ENST00000496458 CCAR1Q8IX12 1150 aaKnown RBP6.8□□□□□ -1.32
SF3B1-212ENST00000496458 C11orf44Q8N8P7 122 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 CTHRC1Q96CG8 243 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 IQCDQ96DY2 449 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 WDYHV1Q96HA8 205 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 ASB2Q96Q27 587 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 HIST1H2AAQ96QV6 131 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 SARGQ9BW04 601 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 AS3MTQ9HBK9 375 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 DNAJB11Q9UBS4 358 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 HPSEQ9Y251 543 aa6.8□□□□□ -1.32
SF3B1-212ENST00000496458 DNAJC9-AS1A6NH13 148 aa6.79□□□□□ -1.32
SF3B1-212ENST00000496458 POC1B-GALNT4F8VUJ3 575 aa6.79□□□□□ -1.32
SF3B1-212ENST00000496458 ZNF543Q08ER8 600 aa6.79□□□□□ -1.32
SF3B1-212ENST00000496458 CERKLQ49MI3 558 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms