RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 TMEM30AQ9NV96 361 aa15.29■□□□□ 0.04
CXCL12-208ENST00000496375 CLDN5O00501 218 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 PSMA7O14818 248 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 FOXD2O60548 495 aaPredicted RBP15.28■□□□□ 0.04
CXCL12-208ENST00000496375 CLSTN1O94985 981 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 CD44P16070 742 aaKnown RBP15.28■□□□□ 0.04
CXCL12-208ENST00000496375 NR2F2P24468 414 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 RPL13P26373 211 aaKnown RBP15.28■□□□□ 0.04
CXCL12-208ENST00000496375 SLC7A9P82251 487 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 IFRD2Q12894 506 aaPredicted RBP15.28■□□□□ 0.04
CXCL12-208ENST00000496375 TAF10Q12962 218 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 BIRC3Q13489 604 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 STIM1Q13586 685 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 DMC1Q14565 340 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 CAMK4Q16566 473 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 TDRD10Q5VZ19 366 aaKnown RBP15.28■□□□□ 0.04
CXCL12-208ENST00000496375 SYT13Q7L8C5 426 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 ACDQ96AP0 544 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 LOXL4Q96JB6 756 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 B3GNT5Q9BYG0 378 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 ARRDC1-AS1Q9H2J1 176 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 SMYD3Q9H7B4 428 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 SMPD4Q9NXE4 827 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 CPQQ9Y646 472 aa15.28■□□□□ 0.04
CXCL12-208ENST00000496375 LRRIQ3A6PVS8 624 aaPredicted RBP15.27■□□□□ 0.04
CXCL12-208ENST00000496375 AKAP3O75969 853 aa15.27■□□□□ 0.04
CXCL12-208ENST00000496375 EPN2O95208 641 aa15.27■□□□□ 0.04
CXCL12-208ENST00000496375 OLFM2O95897 454 aa15.27■□□□□ 0.04
CXCL12-208ENST00000496375 OAS1P00973 400 aaKnown RBP15.27■□□□□ 0.04
CXCL12-208ENST00000496375 RAP1GAPP47736 663 aa15.27■□□□□ 0.04
CXCL12-208ENST00000496375 PMS1P54277 932 aaKnown RBP15.27■□□□□ 0.04
CXCL12-208ENST00000496375 CDH8P55286 799 aa15.27■□□□□ 0.04
CXCL12-208ENST00000496375 SF3A2Q15428 464 aaKnown RBP15.27■□□□□ 0.04
CXCL12-208ENST00000496375 CCDC6Q16204 474 aa15.27■□□□□ 0.04
CXCL12-208ENST00000496375 ZNF699Q32M78 642 aa15.27■□□□□ 0.04
CXCL12-208ENST00000496375 FILIP1Q7Z7B0 1213 aa15.27■□□□□ 0.04
CXCL12-208ENST00000496375 TMC2Q8TDI7 906 aa15.27■□□□□ 0.04
CXCL12-208ENST00000496375 PARD3BQ8TEW8 1205 aa15.27■□□□□ 0.04
CXCL12-208ENST00000496375 SLITRK1Q96PX8 696 aa15.27■□□□□ 0.04
CXCL12-208ENST00000496375 VRTNQ9H8Y1 702 aa15.27■□□□□ 0.04
CXCL12-208ENST00000496375 LAMA1P25391 3075 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 SCAMP3O14828 347 aaKnown RBP15.26■□□□□ 0.03
CXCL12-208ENST00000496375 APBB3O95704 486 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 CYP17A1P05093 508 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 YWHAQP27348 245 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 OPRD1P41143 372 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 AP3M2P53677 418 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 SEC13P55735 322 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 FKBP3Q00688 224 aaKnown RBP15.26■□□□□ 0.03
CXCL12-208ENST00000496375 NCOA4Q13772 614 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 GAB4Q2WGN9 574 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 AASDHQ4L235 1098 aaPredicted RBP15.26■□□□□ 0.03
CXCL12-208ENST00000496375 ANKRD40Q6AI12 368 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 TTI2Q6NXR4 508 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 SCARA5Q6ZMJ2 495 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 NUP93Q8N1F7 819 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 C12orf50Q8NA57 414 aaPredicted RBP15.26■□□□□ 0.03
CXCL12-208ENST00000496375 CCDC26Q8TAB7 109 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 ELMO3Q96BJ8 720 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 TSG101Q99816 390 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 MED10Q9BTT4 135 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 CFAP97Q9P2B7 532 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 FRMD4BQ9Y2L6 1034 aa15.26■□□□□ 0.03
CXCL12-208ENST00000496375 ATP8B3O60423 1300 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 K7EQS6 105 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 BIN1O00499 593 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 SLC9A3R1O14745 358 aaPredicted RBP15.25■□□□□ 0.03
CXCL12-208ENST00000496375 IKBKBO14920 756 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 SLC16A3O15427 465 aaKnown RBP15.25■□□□□ 0.03
CXCL12-208ENST00000496375 RTN3O95197 1032 aaPredicted RBP15.25■□□□□ 0.03
CXCL12-208ENST00000496375 C4BPAP04003 597 aaKnown RBP15.25■□□□□ 0.03
CXCL12-208ENST00000496375 MBL2P11226 248 aaPredicted RBP15.25■□□□□ 0.03
CXCL12-208ENST00000496375 PSMC2P35998 433 aaKnown RBP15.25■□□□□ 0.03
CXCL12-208ENST00000496375 DGKEP52429 567 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 ADAM9Q13443 819 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 PLK5Q496M5 336 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 C2orf27AQ580R0 203 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 ZNF667Q5HYK9 610 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 PPM1JQ5JR12 505 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 C1orf220Q5T0J3 134 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 INTS8Q75QN2 995 aaKnown RBP15.25■□□□□ 0.03
CXCL12-208ENST00000496375 FAM35AQ86V20 835 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 ADGRG2Q8IZP9 1017 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 KIAA1958Q8N8K9 716 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 MLKLQ8NB16 471 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 USP33Q8TEY7 942 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 FBXO32Q969P5 355 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 ZC3H10Q96K80 434 aaKnown RBP15.25■□□□□ 0.03
CXCL12-208ENST00000496375 KCNK16Q96T55 309 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 DUSP15Q9H1R2 295 aaPredicted RBP15.25■□□□□ 0.03
CXCL12-208ENST00000496375 EBF1Q9UH73 591 aa15.25■□□□□ 0.03
CXCL12-208ENST00000496375 MYOFQ9NZM1 2061 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 BICDL2A1A5D9 508 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 ANTXRLA6NF34 631 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 DCLK1O15075 740 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 CETN3O15182 167 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 VNN1O95497 513 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 ZNF806P0C7X5 589 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 DLG4P78352 724 aa15.24■□□□□ 0.03
CXCL12-208ENST00000496375 PAK1Q13153 545 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms