RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 LCLAT1Q6UWP7 414 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 HFE2Q6ZVN8 426 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 LUZP1Q86V48 1076 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 MFSD6LQ8IWD5 586 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 SIX5Q8N196 739 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 CELF5Q8N6W0 485 aaKnown RBP10.36□□□□□ -0.75
CALD1-223ENST00000496024 PDZD8Q8NEN9 1154 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 FLCNQ8NFG4 579 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 TTC8Q8TAM2 541 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 SHC3Q92529 594 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 NDRG1Q92597 394 aaKnown RBP10.36□□□□□ -0.75
CALD1-223ENST00000496024 SECISBP2LQ93073 1101 aaKnown RBP10.36□□□□□ -0.75
CALD1-223ENST00000496024 PBXIP1Q96AQ6 731 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 E2F7Q96AV8 911 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 ASIC4Q96FT7 647 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 RNF38Q9H0F5 515 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 MFSD1Q9H3U5 465 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 CCSER2Q9H7U1 834 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 LRRC4Q9HBW1 653 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 NLRC4Q9NPP4 1024 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 TLR8Q9NR97 1041 aaKnown RBP10.36□□□□□ -0.75
CALD1-223ENST00000496024 FAM207AQ9NSI2 230 aaPredicted RBP10.36□□□□□ -0.75
CALD1-223ENST00000496024 SMPD4Q9NXE4 827 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 IL37Q9NZH6 218 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 ZMYM5Q9UJ78 669 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 NUDT5Q9UKK9 219 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.36□□□□□ -0.75
CALD1-223ENST00000496024 CNTN6Q9UQ52 1028 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 TICRRQ7Z2Z1 1910 aa10.36□□□□□ -0.75
CALD1-223ENST00000496024 HELZP42694 1942 aaKnown RBP10.35□□□□□ -0.75
CALD1-223ENST00000496024 A0A1W2PQH9 124 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 FAM170AA1A519 330 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 KRBA1A5PL33 1030 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 GOLGA6L19H0YKK7 550 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 SCAMP3O14828 347 aaKnown RBP10.35□□□□□ -0.75
CALD1-223ENST00000496024 ZNF263O14978 683 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 XPO1O14980 1071 aaKnown RBP10.35□□□□□ -0.75
CALD1-223ENST00000496024 GPR37L1O60883 481 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 MBL2P11226 248 aaPredicted RBP10.35□□□□□ -0.75
CALD1-223ENST00000496024 LCP1P13796 627 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 UCHL3P15374 230 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 TKTL1P51854 596 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 POLR2FP61218 127 aaKnown RBP10.35□□□□□ -0.75
CALD1-223ENST00000496024 ADIGQ0VDE8 80 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 STILQ15468 1287 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 SLC44A4Q53GD3 710 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 HECTD3Q5T447 861 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 DENND1BQ6P3S1 775 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 APTXQ7Z2E3 356 aaKnown RBP10.35□□□□□ -0.75
CALD1-223ENST00000496024 PASD1Q8IV76 773 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 RIN3Q8TB24 985 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 BPIFB1Q8TDL5 484 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 SH3RF2Q8TEC5 729 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 DEPDC1BQ8WUY9 529 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 ZNF606Q8WXB4 792 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 LRFN3Q9BTN0 628 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 ULBP1Q9BZM6 244 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 NACA2Q9H009 215 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 GANQ9H2C0 597 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 NMUR1Q9HB89 426 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 PNPLA8Q9NP80 782 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 ARHGEF3Q9NR81 526 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 SLC2A4RGQ9NR83 387 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 HEBP1Q9NRV9 189 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 GKN1Q9NS71 199 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 COMMD8Q9NX08 183 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 NAGPAQ9UK23 515 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 SCML2Q9UQR0 700 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 CPQQ9Y646 472 aa10.35□□□□□ -0.75
CALD1-223ENST00000496024 KIF26AQ9ULI4 1882 aaPredicted RBP10.35□□□□□ -0.75
CALD1-223ENST00000496024 COL4A3Q01955 1670 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 FAM92AA1XBS5 289 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 LRRC10BA6NIK2 292 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 SOBPA7XYQ1 873 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 LEFTY2O00292 366 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 MDM4O15151 490 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 EPHB6O15197 1021 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 TEX33O43247 280 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 COCHO43405 550 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 MED7O43513 233 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 TLR5O60602 858 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 TBX18O95935 607 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 OAS1P00973 400 aaKnown RBP10.34□□□□□ -0.75
CALD1-223ENST00000496024 SERPINC1P01008 464 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 SETSIPP0DME0 302 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 IRF1P10914 325 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 RARGP13631 454 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 CD72P21854 359 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 WEE1P30291 646 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 PDE6CP51160 858 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 TPM4P67936 248 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 PFKPQ01813 784 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 PTK2Q05397 1052 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 TNK2Q07912 1038 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 MLF2Q15773 248 aaPredicted RBP10.34□□□□□ -0.75
CALD1-223ENST00000496024 FILIP1LQ4L180 1135 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 PKDCCQ504Y2 493 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 ARHGAP29Q52LW3 1261 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 TRIM68Q6AZZ1 485 aa10.34□□□□□ -0.75
CALD1-223ENST00000496024 PMF1Q6P1K2 205 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms