RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 SMARCAL1Q9NZC9 954 aa25.56■■□□□ 1.68
PPP1R3F-205ENST00000495799 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.56■■□□□ 1.68
PPP1R3F-205ENST00000495799 V9GYY5 206 aaPredicted RBP25.56■■□□□ 1.68
PPP1R3F-205ENST00000495799 PTPRSQ13332 1948 aa25.55■■□□□ 1.68
PPP1R3F-205ENST00000495799 TBC1D4O60343 1298 aa25.55■■□□□ 1.68
PPP1R3F-205ENST00000495799 PYGMP11217 842 aa25.55■■□□□ 1.68
PPP1R3F-205ENST00000495799 DAOAP59103 153 aa25.55■■□□□ 1.68
PPP1R3F-205ENST00000495799 GPR17Q13304 367 aa25.55■■□□□ 1.68
PPP1R3F-205ENST00000495799 PIK3R5Q8WYR1 880 aa25.55■■□□□ 1.68
PPP1R3F-205ENST00000495799 SLC9A7Q96T83 725 aa25.55■■□□□ 1.68
PPP1R3F-205ENST00000495799 HERC2P3Q9BVR0 1158 aa25.55■■□□□ 1.68
PPP1R3F-205ENST00000495799 RHOBTB2Q9BYZ6 727 aa25.55■■□□□ 1.68
PPP1R3F-205ENST00000495799 MTUS1Q9ULD2 1270 aa25.55■■□□□ 1.68
PPP1R3F-205ENST00000495799 BACE2Q9Y5Z0 518 aa25.55■■□□□ 1.68
PPP1R3F-205ENST00000495799 KRIT1O00522 736 aa25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 GJB5O95377 273 aa25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 ZBED1O96006 694 aa25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 SOD2P04179 222 aa25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 GJC1P36383 396 aa25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 YWHAZP63104 245 aaKnown RBP25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 SMC1AQ14683 1233 aaKnown RBP25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 TAF5Q15542 800 aa25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 TMEM240Q5SV17 173 aa25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 DAB2IPQ5VWQ8 1189 aa25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 TMCO2Q7Z6W1 182 aaPredicted RBP25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 GPR161Q8N6U8 529 aaKnown RBP25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 C8orf48Q96LL4 319 aa25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 ZBED2Q9BTP6 218 aa25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 DDX23Q9BUQ8 820 aaKnown RBP25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 MTRRQ9UBK8 725 aa25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 STAP1Q9ULZ2 295 aa25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 PCDHB12Q9Y5F1 795 aa25.54■■□□□ 1.68
PPP1R3F-205ENST00000495799 KRT1P04264 644 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 NOS2P35228 1153 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 MATKP42679 507 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 COPS2P61201 443 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 HTRA4P83105 476 aaPredicted RBP25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 PSMD5Q16401 504 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 CCDC14Q49A88 953 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 CCDC50Q8IVM0 306 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 FIBCD1Q8N539 461 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 HERVK_113Q902F9 699 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 B3GALT6Q96L58 329 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 CFAP57Q96MR6 1250 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 POPDC2Q9HBU9 364 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 CHST7Q9NS84 486 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 RBM12Q9NTZ6 932 aaKnown RBP25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 TMEM30AQ9NV96 361 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 INSL6Q9Y581 213 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 PRPSAP2O60256 369 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 CYP2F1P24903 491 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 MIPP30301 263 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 SLC25A11Q02978 314 aaKnown RBP25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 ELF2Q15723 593 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 TRNP1Q6NT89 227 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 GPRIN1Q7Z2K8 1008 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 SLC13A5Q86YT5 568 aaPredicted RBP25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 SCN4BQ8IWT1 228 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 NOA1Q8NC60 698 aaKnown RBP25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 PHOSPHO2Q8TCD6 241 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 FAM172AQ8WUF8 416 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 RIN2Q8WYP3 895 aaPredicted RBP25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 SLC2A13Q96QE2 648 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 LBHD1Q9BQE6 289 aaPredicted RBP25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 RRN3Q9NYV6 651 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 USP18Q9UMW8 372 aa25.53■■□□□ 1.68
PPP1R3F-205ENST00000495799 TUBBP07437 444 aa25.52■■□□□ 1.68
PPP1R3F-205ENST00000495799 GLUD2P49448 558 aa25.52■■□□□ 1.68
PPP1R3F-205ENST00000495799 NDUFV1P49821 464 aa25.52■■□□□ 1.68
PPP1R3F-205ENST00000495799 ARPP19P56211 112 aa25.52■■□□□ 1.68
PPP1R3F-205ENST00000495799 CDO1Q16878 200 aa25.52■■□□□ 1.68
PPP1R3F-205ENST00000495799 GLE1Q53GS7 698 aaKnown RBP25.52■■□□□ 1.68
PPP1R3F-205ENST00000495799 PM20D1Q6GTS8 502 aa25.52■■□□□ 1.68
PPP1R3F-205ENST00000495799 STRADAQ7RTN6 431 aa25.52■■□□□ 1.68
PPP1R3F-205ENST00000495799 TAS1R1Q7RTX1 841 aa25.52■■□□□ 1.68
PPP1R3F-205ENST00000495799 DDX53Q86TM3 631 aaKnown RBP25.52■■□□□ 1.68
PPP1R3F-205ENST00000495799 FBXO22Q8NEZ5 403 aa25.52■■□□□ 1.68
PPP1R3F-205ENST00000495799 NGRNQ9NPE2 291 aaKnown RBP25.52■■□□□ 1.68
PPP1R3F-205ENST00000495799 USP3Q9Y6I4 520 aa25.52■■□□□ 1.68
PPP1R3F-205ENST00000495799 SLC4A7Q9Y6M7 1214 aa25.52■■□□□ 1.68
PPP1R3F-205ENST00000495799 TRUB2O95900 331 aaKnown RBP25.51■■□□□ 1.67
PPP1R3F-205ENST00000495799 USP17L7P0C7H9 530 aa25.51■■□□□ 1.67
PPP1R3F-205ENST00000495799 CDR1P51861 262 aa25.51■■□□□ 1.67
PPP1R3F-205ENST00000495799 ATP11AP98196 1134 aa25.51■■□□□ 1.67
PPP1R3F-205ENST00000495799 C15orf59Q2T9L4 293 aaPredicted RBP25.51■■□□□ 1.67
PPP1R3F-205ENST00000495799 SLC25A52Q3SY17 297 aa25.51■■□□□ 1.67
PPP1R3F-205ENST00000495799 SLC8B1Q6J4K2 584 aa25.51■■□□□ 1.67
PPP1R3F-205ENST00000495799 DEFB106AQ8N104 65 aa25.51■■□□□ 1.67
PPP1R3F-205ENST00000495799 TBCBQ99426 244 aa25.51■■□□□ 1.67
PPP1R3F-205ENST00000495799 KIAA1671Q9BY89 1806 aa25.5■■□□□ 1.67
PPP1R3F-205ENST00000495799 MTMR11A4FU01 709 aa25.5■■□□□ 1.67
PPP1R3F-205ENST00000495799 CAPN9O14815 690 aa25.5■■□□□ 1.67
PPP1R3F-205ENST00000495799 LTFP02788 710 aa25.5■■□□□ 1.67
PPP1R3F-205ENST00000495799 URODP06132 367 aa25.5■■□□□ 1.67
PPP1R3F-205ENST00000495799 PTPN7P35236 360 aa25.5■■□□□ 1.67
PPP1R3F-205ENST00000495799 DSG1Q02413 1049 aa25.5■■□□□ 1.67
PPP1R3F-205ENST00000495799 KRT17Q04695 432 aa25.5■■□□□ 1.67
PPP1R3F-205ENST00000495799 BOLA3Q53S33 107 aa25.5■■□□□ 1.67
PPP1R3F-205ENST00000495799 PRSS55Q6UWB4 352 aaPredicted RBP25.5■■□□□ 1.67
PPP1R3F-205ENST00000495799 GPR65Q8IYL9 337 aa25.5■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms