RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 NME7Q9Y5B8 376 aa9.37□□□□□ -0.91
SORT1-208ENST00000495777 FAM208BQ5VWN6 2430 aa9.37□□□□□ -0.91
SORT1-208ENST00000495777 SPAG17Q6Q759 2223 aa9.37□□□□□ -0.91
SORT1-208ENST00000495777 DENND4CQ5VZ89 1909 aa9.37□□□□□ -0.91
SORT1-208ENST00000495777 WDFY3Q8IZQ1 3526 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 UBE4BO95155 1302 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 EML5Q05BV3 1969 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 ZNF233A6NK53 670 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 C1QTNF9BB2RNN3 333 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 PATE3B3GLJ2 98 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 SLC9A3R1O14745 358 aaPredicted RBP9.36□□□□□ -0.91
SORT1-208ENST00000495777 PRPF6O94906 941 aaKnown RBP9.36□□□□□ -0.91
SORT1-208ENST00000495777 TNNC2P02585 160 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 PDGFRBP09619 1106 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 C1QTNF9P0C862 333 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 IDEP14735 1019 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 HOXD13P35453 343 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 GRIK1P39086 918 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 KIR2DL1P43626 348 aaPredicted RBP9.36□□□□□ -0.91
SORT1-208ENST00000495777 AFMP43652 599 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 CACNA2D1P54289 1103 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 SEC13P55735 322 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 IRX4P78413 519 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 DPYDQ12882 1025 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 STIM1Q13586 685 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 DHCR24Q15392 516 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 CT47A1Q5JQC4 288 aaPredicted RBP9.36□□□□□ -0.91
SORT1-208ENST00000495777 SPDYCQ5MJ68 293 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 PEAR1Q5VY43 1037 aaPredicted RBP9.36□□□□□ -0.91
SORT1-208ENST00000495777 RHBDF2Q6PJF5 856 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 CYP2U1Q7Z449 544 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 SFTPA1Q8IWL2 248 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 PHTF2Q8N3S3 785 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 IL17RCQ8NAC3 791 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 GLIS3Q8NEA6 775 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 TTC16Q8NEE8 873 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 FNBP1Q96RU3 617 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 PNKPQ96T60 521 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 DUSP9Q99956 384 aaKnown RBP9.36□□□□□ -0.91
SORT1-208ENST00000495777 KIAA1586Q9HCI6 787 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 EXOC1Q9NV70 894 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 KIAA1468Q9P260 1216 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 CPQQ9Y646 472 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 ZFYVE26Q68DK2 2539 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 RALGAPA1Q6GYQ0 2036 aa9.36□□□□□ -0.91
SORT1-208ENST00000495777 F8VP50 259 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 SGK1O00141 431 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 TNFRSF10BO14763 440 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 EIF3DO15371 548 aaKnown RBP eCLIP9.35□□□□□ -0.91
SORT1-208ENST00000495777 ADAM23O75077 832 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 ALDH1A2O94788 518 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 RHOBTB3O94955 611 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 KAT7O95251 611 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 STAU1O95793 577 aaKnown RBP9.35□□□□□ -0.91
SORT1-208ENST00000495777 ADH1CP00326 375 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 CST3P01034 146 aaPredicted RBP9.35□□□□□ -0.91
SORT1-208ENST00000495777 RPN1P04843 607 aaKnown RBP9.35□□□□□ -0.91
SORT1-208ENST00000495777 ANXA13P27216 316 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 GRIA2P42262 883 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 TNFRSF4P43489 277 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 SLC6A11P48066 632 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 CYP27A1Q02318 531 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 LMAN2Q12907 356 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 TAF10Q12962 218 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 MAP7D1Q3KQU3 841 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 COBLL1Q53SF7 1204 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 MDH1BQ5I0G3 518 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 EOGTQ5NDL2 527 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 CAVIN1Q6NZI2 390 aaKnown RBP9.35□□□□□ -0.91
SORT1-208ENST00000495777 LPCAT2Q7L5N7 544 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 EPM2AIP1Q7L775 607 aaPredicted RBP9.35□□□□□ -0.91
SORT1-208ENST00000495777 TRAPPC11Q7Z392 1133 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 C12orf40Q86WS4 652 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 DDX42Q86XP3 938 aaKnown RBP eCLIP9.35□□□□□ -0.91
SORT1-208ENST00000495777 CCDC33Q8N5R6 958 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 ALLCQ8N6M5 410 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 TXNDC5Q8NBS9 432 aaKnown RBP9.35□□□□□ -0.91
SORT1-208ENST00000495777 WHAMMQ8TF30 809 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 OVCA2Q8WZ82 227 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 GATA6Q92908 595 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 ZFRQ96KR1 1074 aaKnown RBP9.35□□□□□ -0.91
SORT1-208ENST00000495777 MRPL45Q9BRJ2 306 aaKnown RBP9.35□□□□□ -0.91
SORT1-208ENST00000495777 ADAM33Q9BZ11 813 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 ELOVL4Q9GZR5 314 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 GZF1Q9H116 711 aaPredicted RBP9.35□□□□□ -0.91
SORT1-208ENST00000495777 SMPD4Q9NXE4 827 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 HSPBP1Q9NZL4 362 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 CFAP97Q9P2B7 532 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 MBD1Q9UIS9 605 aaPredicted RBP9.35□□□□□ -0.91
SORT1-208ENST00000495777 ZMIZ1Q9ULJ6 1067 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 R3HCC1Q9Y3T6 440 aaKnown RBP9.35□□□□□ -0.91
SORT1-208ENST00000495777 KIAA1549LQ6ZVL6 1849 aa9.35□□□□□ -0.91
SORT1-208ENST00000495777 E2F8A0AVK6 867 aa9.34□□□□□ -0.91
SORT1-208ENST00000495777 TMEM8BA6NDV4 472 aa9.34□□□□□ -0.91
SORT1-208ENST00000495777 UPK3BL1B0FP48 263 aa9.34□□□□□ -0.91
SORT1-208ENST00000495777 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.34□□□□□ -0.91
SORT1-208ENST00000495777 UPK3BL2E5RIL1 263 aa9.34□□□□□ -0.91
SORT1-208ENST00000495777 TULP1O00294 542 aaPredicted RBP9.34□□□□□ -0.91
SORT1-208ENST00000495777 HOXC11O43248 304 aaPredicted RBP9.34□□□□□ -0.91
SORT1-208ENST00000495777 TGFB1I1O43294 461 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms