RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 TRMT11Q7Z4G4 463 aaKnown RBP18.68■□□□□ 0.58
TMEM53-209ENST00000495630 C12orf40Q86WS4 652 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 CBWD2Q8IUF1 395 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 NUP93Q8N1F7 819 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 PDZD8Q8NEN9 1154 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 OR6B3Q8NGW1 331 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 OVCA2Q8WZ82 227 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 DUSP9Q99956 384 aaKnown RBP18.68■□□□□ 0.58
TMEM53-209ENST00000495630 MRPL45Q9BRJ2 306 aaKnown RBP18.68■□□□□ 0.58
TMEM53-209ENST00000495630 PANK2Q9BZ23 570 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 ELOVL4Q9GZR5 314 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 MSRB2Q9Y3D2 182 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 PCNX2A6NKB5 2137 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 GON4LQ3T8J9 2241 aa18.68■□□□□ 0.58
TMEM53-209ENST00000495630 ATRXP46100 2492 aa18.67■□□□□ 0.58
TMEM53-209ENST00000495630 TCRBV21S2A2A0A5A6 115 aa18.67■□□□□ 0.58
TMEM53-209ENST00000495630 TBC1D3BA6NDS4 549 aa18.67■□□□□ 0.58
TMEM53-209ENST00000495630 AP5Z1O43299 807 aa18.67■□□□□ 0.58
TMEM53-209ENST00000495630 RTN3O95197 1032 aaPredicted RBP18.67■□□□□ 0.58
TMEM53-209ENST00000495630 ITPKAP23677 461 aa18.67■□□□□ 0.58
TMEM53-209ENST00000495630 YWHAQP27348 245 aa18.67■□□□□ 0.58
TMEM53-209ENST00000495630 STAT6P42226 847 aa18.67■□□□□ 0.58
TMEM53-209ENST00000495630 ATXN3P54252 364 aaPredicted RBP18.67■□□□□ 0.58
TMEM53-209ENST00000495630 BTBD8Q5XKL5 378 aa18.67■□□□□ 0.58
TMEM53-209ENST00000495630 PHTF2Q8N3S3 785 aa18.67■□□□□ 0.58
TMEM53-209ENST00000495630 HDDC3Q8N4P3 179 aa18.67■□□□□ 0.58
TMEM53-209ENST00000495630 HSPBP1Q9NZL4 362 aa18.67■□□□□ 0.58
TMEM53-209ENST00000495630 NME7Q9Y5B8 376 aa18.67■□□□□ 0.58
TMEM53-209ENST00000495630 ASCC3Q8N3C0 2202 aaKnown RBP18.67■□□□□ 0.58
TMEM53-209ENST00000495630 MYO16Q9Y6X6 1858 aa18.67■□□□□ 0.58
TMEM53-209ENST00000495630 KIAA1549LQ6ZVL6 1849 aa18.66■□□□□ 0.58
TMEM53-209ENST00000495630 H0Y626 953 aa18.66■□□□□ 0.58
TMEM53-209ENST00000495630 SCAMP3O14828 347 aaKnown RBP18.66■□□□□ 0.58
TMEM53-209ENST00000495630 HYAL3O43820 417 aaPredicted RBP18.66■□□□□ 0.58
TMEM53-209ENST00000495630 TRIM16O95361 564 aa18.66■□□□□ 0.58
TMEM53-209ENST00000495630 SERPINF2P08697 491 aa18.66■□□□□ 0.58
TMEM53-209ENST00000495630 SIM1P81133 766 aaPredicted RBP18.66■□□□□ 0.58
TMEM53-209ENST00000495630 GFPT1Q06210 699 aaPredicted RBP18.66■□□□□ 0.58
TMEM53-209ENST00000495630 COL9A2Q14055 689 aaPredicted RBP18.66■□□□□ 0.58
TMEM53-209ENST00000495630 SNX30Q5VWJ9 437 aa18.66■□□□□ 0.58
TMEM53-209ENST00000495630 RABEPKQ7Z6M1 372 aa18.66■□□□□ 0.58
TMEM53-209ENST00000495630 ETFBKMTQ8IXQ9 262 aa18.66■□□□□ 0.58
TMEM53-209ENST00000495630 ZCCHC14Q8WYQ9 949 aaKnown RBP18.66■□□□□ 0.58
TMEM53-209ENST00000495630 DEC1Q9P2X7 70 aa18.66■□□□□ 0.58
TMEM53-209ENST00000495630 CHORDC1Q9UHD1 332 aaPredicted RBP18.66■□□□□ 0.58
TMEM53-209ENST00000495630 MORC2Q9Y6X9 1032 aaPredicted RBP18.66■□□□□ 0.58
TMEM53-209ENST00000495630 IGF2RP11717 2491 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 FAM221BA6H8Z2 402 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 HOXC11O43248 304 aaPredicted RBP18.65■□□□□ 0.58
TMEM53-209ENST00000495630 CFIP05156 583 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 TNNI1P19237 187 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 PDCP20941 246 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 CACNA2D1P54289 1103 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 TNNC1P63316 161 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 KDSRQ06136 332 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 WDR72Q3MJ13 1102 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 HECTD3Q5T447 861 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 ZNF513Q8N8E2 541 aaPredicted RBP18.65■□□□□ 0.58
TMEM53-209ENST00000495630 ZFRQ96KR1 1074 aaKnown RBP18.65■□□□□ 0.58
TMEM53-209ENST00000495630 B3GNT5Q9BYG0 378 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 ZNF518BQ9C0D4 1074 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 LRRC27Q9C0I9 530 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 ZDHHC4Q9NPG8 344 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 TMEM30AQ9NV96 361 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 SH3BP1Q9Y3L3 701 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 STARD13Q9Y3M8 1113 aa18.65■□□□□ 0.58
TMEM53-209ENST00000495630 SPAARA0A1B0GVQ0 90 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 VPS37CA5D8V6 355 aaPredicted RBP18.64■□□□□ 0.57
TMEM53-209ENST00000495630 A8MXQ7 604 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 CLDN5O00501 218 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 ZBTB24O43167 697 aaPredicted RBP18.64■□□□□ 0.57
TMEM53-209ENST00000495630 COCHO43405 550 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 TULP3O75386 442 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 STAU1O95793 577 aaKnown RBP18.64■□□□□ 0.57
TMEM53-209ENST00000495630 HOXD13P35453 343 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 TUBP50607 506 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 RPL6Q02878 288 aaKnown RBP18.64■□□□□ 0.57
TMEM53-209ENST00000495630 HNRNPDQ14103 355 aaKnown RBP18.64■□□□□ 0.57
TMEM53-209ENST00000495630 PSMD6Q15008 389 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 SNRNP35Q16560 246 aaKnown RBP18.64■□□□□ 0.57
TMEM53-209ENST00000495630 KIAA1211LQ6NV74 962 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 LRSAM1Q6UWE0 723 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 NAT16Q8N8M0 369 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 RDH13Q8NBN7 331 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 B3GALNT2Q8NCR0 500 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 FBXO32Q969P5 355 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 CAPN10Q9HC96 672 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 SPHK2Q9NRA0 654 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 COMMD8Q9NX08 183 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 IL37Q9NZH6 218 aa18.64■□□□□ 0.57
TMEM53-209ENST00000495630 A0A087X0B3 334 aa18.63■□□□□ 0.57
TMEM53-209ENST00000495630 EIF3DO15371 548 aaKnown RBP eCLIP18.63■□□□□ 0.57
TMEM53-209ENST00000495630 OPHN1O60890 802 aa18.63■□□□□ 0.57
TMEM53-209ENST00000495630 ZNF217O75362 1048 aa18.63■□□□□ 0.57
TMEM53-209ENST00000495630 DLATP10515 647 aaKnown RBP18.63■□□□□ 0.57
TMEM53-209ENST00000495630 GABRG2P18507 467 aa18.63■□□□□ 0.57
TMEM53-209ENST00000495630 NTSR1P30989 418 aa18.63■□□□□ 0.57
TMEM53-209ENST00000495630 ATICP31939 592 aa18.63■□□□□ 0.57
TMEM53-209ENST00000495630 SNRPFP62306 86 aaKnown RBP18.63■□□□□ 0.57
TMEM53-209ENST00000495630 ZNF33AQ06730 810 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms