RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 YARSP54577 528 aaKnown RBP9.59□□□□□ -0.87
GARNL3-219ENST00000495172 ST3GAL1Q11201 340 aa9.59□□□□□ -0.87
GARNL3-219ENST00000495172 SAFBQ15424 915 aaKnown RBP eCLIP9.59□□□□□ -0.87
GARNL3-219ENST00000495172 TGIF1Q15583 401 aa9.59□□□□□ -0.87
GARNL3-219ENST00000495172 TBR1Q16650 682 aa9.59□□□□□ -0.87
GARNL3-219ENST00000495172 FUT11Q495W5 492 aa9.59□□□□□ -0.87
GARNL3-219ENST00000495172 C3orf38Q5JPI3 329 aa9.59□□□□□ -0.87
GARNL3-219ENST00000495172 ZC3H18Q86VM9 953 aaKnown RBP9.59□□□□□ -0.87
GARNL3-219ENST00000495172 TICAM1Q8IUC6 712 aa9.59□□□□□ -0.87
GARNL3-219ENST00000495172 SAP25Q8TEE9 199 aa9.59□□□□□ -0.87
GARNL3-219ENST00000495172 MTMR9Q96QG7 549 aa9.59□□□□□ -0.87
GARNL3-219ENST00000495172 ZCWPW1Q9H0M4 648 aa9.59□□□□□ -0.87
GARNL3-219ENST00000495172 TMEM206Q9H813 350 aa9.59□□□□□ -0.87
GARNL3-219ENST00000495172 VPS54Q9P1Q0 977 aa9.59□□□□□ -0.87
GARNL3-219ENST00000495172 USP36Q9P275 1121 aaKnown RBP9.59□□□□□ -0.87
GARNL3-219ENST00000495172 DDX25Q9UHL0 483 aaKnown RBP9.59□□□□□ -0.87
GARNL3-219ENST00000495172 SATB2Q9UPW6 733 aa9.59□□□□□ -0.87
GARNL3-219ENST00000495172 STARD13Q9Y3M8 1113 aa9.59□□□□□ -0.87
GARNL3-219ENST00000495172 PPME1Q9Y570 386 aa9.59□□□□□ -0.87
GARNL3-219ENST00000495172 CKAP5Q14008 2032 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 RP1L1Q8IWN7 2480 aaPredicted RBP9.58□□□□□ -0.88
GARNL3-219ENST00000495172 hCG_1984214I3L0E3 225 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 HIP1O00291 1037 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 ZBTB24O43167 697 aaPredicted RBP9.58□□□□□ -0.88
GARNL3-219ENST00000495172 DGAT1O75907 488 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 DXOO77932 396 aaKnown RBP9.58□□□□□ -0.88
GARNL3-219ENST00000495172 AGFG2O95081 481 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 CENPBP07199 599 aaPredicted RBP9.58□□□□□ -0.88
GARNL3-219ENST00000495172 ABCB4P21439 1286 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 MCM5P33992 734 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 LIFRP42702 1097 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 ERVPABLB-1P60509 514 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 KCNB1Q14721 858 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 EPHA7Q15375 998 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 INAVAQ3KP66 663 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 FOXR1Q6PIV2 292 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 USP53Q70EK8 1073 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 TICAM2Q86XR7 235 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 TEX2Q8IWB9 1127 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 ETFBKMTQ8IXQ9 262 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 ZNF713Q8N859 430 aaPredicted RBP9.58□□□□□ -0.88
GARNL3-219ENST00000495172 TERB1Q8NA31 727 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 CADM4Q8NFZ8 388 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 RFFLQ8WZ73 363 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 WBP2Q969T9 261 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 ZBTB45Q96K62 511 aaPredicted RBP9.58□□□□□ -0.88
GARNL3-219ENST00000495172 CCDC94Q9BW85 323 aaPredicted RBP9.58□□□□□ -0.88
GARNL3-219ENST00000495172 MFRPQ9BY79 579 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 RNF38Q9H0F5 515 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 SLC25A18Q9H1K4 315 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 OSBPL2Q9H1P3 480 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 ZSWIM4Q9H7M6 989 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 POLR1BQ9H9Y6 1135 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 ITM2CQ9NQX7 267 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 CNTN3Q9P232 1028 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 ARHGAP26Q9UNA1 814 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 NFE2L3Q9Y4A8 694 aa9.58□□□□□ -0.88
GARNL3-219ENST00000495172 SCN1AP35498 2009 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 CYP3A7-CYP3A51PA0A087WV96 503 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 GOLGA8AA7E2F4 631 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 GOLGA8BA8MQT2 603 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 CASC3O15234 703 aaKnown RBP9.57□□□□□ -0.88
GARNL3-219ENST00000495172 DKC1O60832 514 aaKnown RBP eCLIP9.57□□□□□ -0.888e-6■□□□□ 10.8
GARNL3-219ENST00000495172 PPFIA2O75334 1257 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 CSO75390 466 aaKnown RBP9.57□□□□□ -0.88
GARNL3-219ENST00000495172 PRPF40AO75400 957 aaKnown RBP9.57□□□□□ -0.88
GARNL3-219ENST00000495172 WNT1P04628 370 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 WT1P19544 449 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-219ENST00000495172 CYP3A7P24462 503 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 ACSL1P33121 698 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 LSSP48449 732 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 AARSP49588 968 aaKnown RBP eCLIP9.57□□□□□ -0.88
GARNL3-219ENST00000495172 RARRES1P49788 294 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 SKOR1P84550 965 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 SLC10A6Q3KNW5 377 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 ZNF568Q3ZCX4 644 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 TMTC2Q8N394 836 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 NANOS1Q8WY41 292 aaKnown RBP9.57□□□□□ -0.88
GARNL3-219ENST00000495172 HAS1Q92839 578 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 SENP8Q96LD8 212 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 CCNL2Q96S94 520 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-219ENST00000495172 MMS19Q96T76 1030 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 GABRG3Q99928 467 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 TMPRSS4Q9NRS4 437 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 TOPORSQ9NS56 1045 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-219ENST00000495172 THSD1Q9NS62 852 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 CFAP97Q9P2B7 532 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 ZMYM5Q9UJ78 669 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 SVILO95425 2214 aa9.57□□□□□ -0.88
GARNL3-219ENST00000495172 COL27A1Q8IZC6 1860 aaPredicted RBP9.57□□□□□ -0.88
GARNL3-219ENST00000495172 VPS37CA5D8V6 355 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-219ENST00000495172 LAD1O00515 517 aa9.56□□□□□ -0.88
GARNL3-219ENST00000495172 WNT9AO14904 365 aa9.56□□□□□ -0.88
GARNL3-219ENST00000495172 PAPSS1O43252 624 aaPredicted RBP9.56□□□□□ -0.88
GARNL3-219ENST00000495172 MTSS1O43312 755 aa9.56□□□□□ -0.88
GARNL3-219ENST00000495172 SEMA7AO75326 666 aa9.56□□□□□ -0.88
GARNL3-219ENST00000495172 FSBPO95073 299 aa9.56□□□□□ -0.88
GARNL3-219ENST00000495172 CYP2F1P24903 491 aa9.56□□□□□ -0.88
GARNL3-219ENST00000495172 EIF2DP41214 584 aaKnown RBP9.56□□□□□ -0.88
GARNL3-219ENST00000495172 GRIA4P48058 902 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms