RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 TBX18O95935 607 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 PXNP49023 591 aaPredicted RBP11.24□□□□□ -0.61
NELFE-213ENST00000494956 STX17P56962 302 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 MCCD1P59942 119 aaPredicted RBP11.24□□□□□ -0.61
NELFE-213ENST00000494956 SLC7A9P82251 487 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 MESP2Q0VG99 397 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 LRMPQ12912 555 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 LRRC32Q14392 662 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 PDGFRLQ15198 375 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 GAB4Q2WGN9 574 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 COBLL1Q53SF7 1204 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 ZC3H14Q6PJT7 736 aaKnown RBP11.24□□□□□ -0.61
NELFE-213ENST00000494956 CLEC20AQ6ZU45 233 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 FILIP1Q7Z7B0 1213 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 UNC93AQ86WB7 457 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 ZC3H3Q8IXZ2 948 aaKnown RBP11.24□□□□□ -0.61
NELFE-213ENST00000494956 SPEM1Q8N4L4 309 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 CPA6Q8N4T0 437 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 FBXL13Q8NEE6 735 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 ATRIPQ8WXE1 791 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 MSANTD3Q96H12 275 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 CCDC34Q96HJ3 373 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 ZFRQ96KR1 1074 aaKnown RBP11.24□□□□□ -0.61
NELFE-213ENST00000494956 CEP295NLQ96MC4 621 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 TSG101Q99816 390 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 DUSP9Q99956 384 aaKnown RBP11.24□□□□□ -0.61
NELFE-213ENST00000494956 HINFPQ9BQA5 517 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 NT5C1AQ9BXI3 368 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 CSNK1G1Q9HCP0 422 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 OSER1Q9NX31 292 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 RAB20Q9NX57 234 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 IL37Q9NZH6 218 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 CFAP97Q9P2B7 532 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 NUDT5Q9UKK9 219 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 ATP8B3O60423 1300 aa11.24□□□□□ -0.61
NELFE-213ENST00000494956 RIF1Q5UIP0 2472 aaKnown RBP11.23□□□□□ -0.61
NELFE-213ENST00000494956 MDM4O15151 490 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 CYP26A1O43174 497 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 RNF40O75150 1001 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 RTN3O95197 1032 aaPredicted RBP11.23□□□□□ -0.61
NELFE-213ENST00000494956 CYP17A1P05093 508 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 FAM200BP0CF97 657 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 IRF1P10914 325 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 TCF3P15923 654 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 OPRD1P41143 372 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 CCR3P51677 355 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 FKBP3Q00688 224 aaKnown RBP11.23□□□□□ -0.61
NELFE-213ENST00000494956 DGKKQ5KSL6 1271 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 C12orf40Q86WS4 652 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 KIAA2013Q8IYS2 634 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 SLC4A11Q8NBS3 891 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 ATP2A3Q93084 1043 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 SLC35C1Q96A29 364 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 HNRNPABQ99729 332 aaKnown RBP11.23□□□□□ -0.61
NELFE-213ENST00000494956 P2RY13Q9BPV8 354 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 CYP3A43Q9HB55 503 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 NMUR1Q9HB89 426 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 CISHQ9NSE2 258 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 CTNND2Q9UQB3 1225 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 PCDHGA2Q9Y5H1 932 aa11.23□□□□□ -0.61
NELFE-213ENST00000494956 FAM92AA1XBS5 289 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 SLC16A3O15427 465 aaKnown RBP11.22□□□□□ -0.61
NELFE-213ENST00000494956 HRO43593 1189 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 CALCAP01258 141 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 ZDHHC11BP0C7U3 371 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 ACO1P21399 889 aaKnown RBP11.22□□□□□ -0.61
NELFE-213ENST00000494956 GTF2H1P32780 548 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 SLC6A11P48066 632 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 RAD23BP54727 409 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 SEC13P55735 322 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 ENPEPQ07075 957 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 GRSF1Q12849 480 aaKnown RBP eCLIP11.22□□□□□ -0.61
NELFE-213ENST00000494956 MORC3Q14149 939 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 CAMK4Q16566 473 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 TTI2Q6NXR4 508 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 C1orf228Q6PIY5 440 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 MAMSTRQ6ZN01 415 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 ADGRG2Q8IZP9 1017 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 CCDC150Q8NCX0 1101 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 PDZD8Q8NEN9 1154 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 RPLP0P6Q8NHW5 317 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 NELFBQ8WX92 580 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 KAT5Q92993 513 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 CD101Q93033 1021 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 HEXIM2Q96MH2 286 aaKnown RBP11.22□□□□□ -0.61
NELFE-213ENST00000494956 SEMA4AQ9H3S1 761 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 EHD2Q9NZN4 543 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 ARMCX3Q9UH62 379 aaPredicted RBP11.22□□□□□ -0.61
NELFE-213ENST00000494956 SMG5Q9UPR3 1016 aaKnown RBP11.22□□□□□ -0.61
NELFE-213ENST00000494956 CFAP54Q96N23 3096 aa11.22□□□□□ -0.61
NELFE-213ENST00000494956 GPR179Q6PRD1 2367 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 A0A1W2PQH9 124 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 TULP2O00295 520 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 PSMA7O14818 248 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 PPP3CCP48454 512 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 PDE6CP51160 858 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 LRRC63Q05C16 580 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 DHCR24Q15392 516 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 CCDC40Q4G0X9 1142 aa11.21□□□□□ -0.61
NELFE-213ENST00000494956 HECTD3Q5T447 861 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms