RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 GMIPQ9P107 970 aa19.03■□□□□ 0.64
COL20A1-207ENST00000494913 FBXO4Q9UKT5 387 aa19.03■□□□□ 0.64
COL20A1-207ENST00000494913 CPQQ9Y646 472 aa19.03■□□□□ 0.64
COL20A1-207ENST00000494913 KIF26AQ9ULI4 1882 aaPredicted RBP19.02■□□□□ 0.64
COL20A1-207ENST00000494913 FAM92AA1XBS5 289 aa19.02■□□□□ 0.63
COL20A1-207ENST00000494913 OLFM2O95897 454 aa19.02■□□□□ 0.63
COL20A1-207ENST00000494913 MBL2P11226 248 aaPredicted RBP19.02■□□□□ 0.63
COL20A1-207ENST00000494913 RAD23BP54727 409 aa19.02■□□□□ 0.63
COL20A1-207ENST00000494913 CUL2Q13617 745 aa19.02■□□□□ 0.63
COL20A1-207ENST00000494913 EML3Q32P44 896 aa19.02■□□□□ 0.63
COL20A1-207ENST00000494913 HECTD3Q5T447 861 aa19.02■□□□□ 0.63
COL20A1-207ENST00000494913 SNX30Q5VWJ9 437 aa19.02■□□□□ 0.63
COL20A1-207ENST00000494913 CPA6Q8N4T0 437 aa19.02■□□□□ 0.63
COL20A1-207ENST00000494913 ATP2A3Q93084 1043 aa19.02■□□□□ 0.63
COL20A1-207ENST00000494913 NKD2Q969F2 451 aaPredicted RBP19.02■□□□□ 0.63
COL20A1-207ENST00000494913 TMEM176AQ96HP8 235 aa19.02■□□□□ 0.63
COL20A1-207ENST00000494913 SRRTQ9BXP5 876 aaKnown RBP19.02■□□□□ 0.63
COL20A1-207ENST00000494913 FAM124BQ9H5Z6 455 aaPredicted RBP19.02■□□□□ 0.63
COL20A1-207ENST00000494913 ECT2Q9H8V3 914 aa19.02■□□□□ 0.63
COL20A1-207ENST00000494913 HHLA1C9JL84 531 aa19.01■□□□□ 0.63
COL20A1-207ENST00000494913 GOLGA6L22H0YM25 854 aa19.01■□□□□ 0.63
COL20A1-207ENST00000494913 COCHO43405 550 aa19.01■□□□□ 0.63
COL20A1-207ENST00000494913 ZDHHC11BP0C7U3 371 aa19.01■□□□□ 0.63
COL20A1-207ENST00000494913 PGFP49763 221 aa19.01■□□□□ 0.63
COL20A1-207ENST00000494913 AMPD2Q01433 879 aa19.01■□□□□ 0.63
COL20A1-207ENST00000494913 ZNF528Q3MIS6 628 aa19.01■□□□□ 0.63
COL20A1-207ENST00000494913 DGKKQ5KSL6 1271 aa19.01■□□□□ 0.63
COL20A1-207ENST00000494913 TSSK4Q6SA08 328 aa19.01■□□□□ 0.63
COL20A1-207ENST00000494913 ASCL5Q7RTU5 278 aa19.01■□□□□ 0.63
COL20A1-207ENST00000494913 GPRIN1Q7Z2K8 1008 aa19.01■□□□□ 0.63
COL20A1-207ENST00000494913 CHFRQ96EP1 664 aa19.01■□□□□ 0.63
COL20A1-207ENST00000494913 DUSP16Q9BY84 665 aa19.01■□□□□ 0.63
COL20A1-207ENST00000494913 CCSER2Q9H7U1 834 aa19.01■□□□□ 0.63
COL20A1-207ENST00000494913 RIF1Q5UIP0 2472 aaKnown RBP19.01■□□□□ 0.63
COL20A1-207ENST00000494913 GNA14O95837 355 aa19■□□□□ 0.63
COL20A1-207ENST00000494913 ACO1P21399 889 aaKnown RBP19■□□□□ 0.63
COL20A1-207ENST00000494913 GJA4P35212 333 aa19■□□□□ 0.63
COL20A1-207ENST00000494913 CCINQ13939 588 aa19■□□□□ 0.63
COL20A1-207ENST00000494913 GAS6Q14393 721 aa19■□□□□ 0.63
COL20A1-207ENST00000494913 ZC3H14Q6PJT7 736 aaKnown RBP19■□□□□ 0.63
COL20A1-207ENST00000494913 MAMSTRQ6ZN01 415 aa19■□□□□ 0.63
COL20A1-207ENST00000494913 IER2Q9BTL4 223 aa19■□□□□ 0.63
COL20A1-207ENST00000494913 CFAP97Q9P2B7 532 aa19■□□□□ 0.63
COL20A1-207ENST00000494913 PATJQ8NI35 1801 aa19■□□□□ 0.63
COL20A1-207ENST00000494913 PRR23AA6NEV1 266 aa18.99■□□□□ 0.63
COL20A1-207ENST00000494913 TRDMT1O14717 391 aaKnown RBP18.99■□□□□ 0.63
COL20A1-207ENST00000494913 SCAMP3O14828 347 aaKnown RBP18.99■□□□□ 0.63
COL20A1-207ENST00000494913 PMM2O15305 246 aa18.99■□□□□ 0.63
COL20A1-207ENST00000494913 TUBP50607 506 aa18.99■□□□□ 0.63
COL20A1-207ENST00000494913 GALK1P51570 392 aa18.99■□□□□ 0.63
COL20A1-207ENST00000494913 YWHAEP62258 255 aaKnown RBP18.99■□□□□ 0.63
COL20A1-207ENST00000494913 CETN1Q12798 172 aa18.99■□□□□ 0.63
COL20A1-207ENST00000494913 GRSF1Q12849 480 aaKnown RBP eCLIP18.99■□□□□ 0.63
COL20A1-207ENST00000494913 NR1H3Q13133 447 aa18.99■□□□□ 0.63
COL20A1-207ENST00000494913 Q6ZS52 159 aa18.99■□□□□ 0.63
COL20A1-207ENST00000494913 TRIM59Q8IWR1 403 aa18.99■□□□□ 0.63
COL20A1-207ENST00000494913 NACA2Q9H009 215 aa18.99■□□□□ 0.63
COL20A1-207ENST00000494913 PNPLA8Q9NP80 782 aa18.99■□□□□ 0.63
COL20A1-207ENST00000494913 PRMT8Q9NR22 394 aaPredicted RBP18.99■□□□□ 0.63
COL20A1-207ENST00000494913 TLR8Q9NR97 1041 aaKnown RBP18.99■□□□□ 0.63
COL20A1-207ENST00000494913 SCML2Q9UQR0 700 aa18.99■□□□□ 0.63
COL20A1-207ENST00000494913 PTPRZ1P23471 2315 aaPredicted RBP18.99■□□□□ 0.63
COL20A1-207ENST00000494913 CYP26A1O43174 497 aa18.98■□□□□ 0.63
COL20A1-207ENST00000494913 FGFR1OPO95684 399 aaKnown RBP18.98■□□□□ 0.63
COL20A1-207ENST00000494913 TBXAS1P24557 533 aaPredicted RBP18.98■□□□□ 0.63
COL20A1-207ENST00000494913 CXCL12P48061 93 aa18.98■□□□□ 0.63
COL20A1-207ENST00000494913 CCR3P51677 355 aa18.98■□□□□ 0.63
COL20A1-207ENST00000494913 KCNH2Q12809 1159 aa18.98■□□□□ 0.63
COL20A1-207ENST00000494913 TMEM196Q5HYL7 178 aa18.98■□□□□ 0.63
COL20A1-207ENST00000494913 NAIF1Q69YI7 327 aaPredicted RBP18.98■□□□□ 0.63
COL20A1-207ENST00000494913 FSTL4Q6MZW2 842 aa18.98■□□□□ 0.63
COL20A1-207ENST00000494913 DDX42Q86XP3 938 aaKnown RBP eCLIP18.98■□□□□ 0.63
COL20A1-207ENST00000494913 SYNPOQ8N3V7 929 aa18.98■□□□□ 0.63
COL20A1-207ENST00000494913 SPEM1Q8N4L4 309 aa18.98■□□□□ 0.63
COL20A1-207ENST00000494913 NT5C1BQ96P26 610 aa18.98■□□□□ 0.63
COL20A1-207ENST00000494913 CLSTN2Q9H4D0 955 aa18.98■□□□□ 0.63
COL20A1-207ENST00000494913 FBRSL1Q9HCM7 1045 aaKnown RBP18.98■□□□□ 0.63
COL20A1-207ENST00000494913 RWDD2AQ9UIY3 292 aa18.98■□□□□ 0.63
COL20A1-207ENST00000494913 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.98■□□□□ 0.63
COL20A1-207ENST00000494913 HELZP42694 1942 aaKnown RBP18.98■□□□□ 0.63
COL20A1-207ENST00000494913 SLC9A3R1O14745 358 aaPredicted RBP18.97■□□□□ 0.63
COL20A1-207ENST00000494913 P4HA2O15460 535 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 TLR5O60602 858 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 NFATC1O95644 943 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 KIF11P52732 1056 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 MARSP56192 900 aaKnown RBP18.97■□□□□ 0.63
COL20A1-207ENST00000494913 SATB1Q01826 763 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 PPP2R5DQ14738 602 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 ARHGAP17Q68EM7 881 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 CLEC17AQ6ZS10 378 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 ADGRG2Q8IZP9 1017 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 KIAA1958Q8N8K9 716 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 LMO3Q8TAP4 145 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 ATRIPQ8WXE1 791 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 ZFRQ96KR1 1074 aaKnown RBP18.97■□□□□ 0.63
COL20A1-207ENST00000494913 P2RY13Q9BPV8 354 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 SEMA4AQ9H3S1 761 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 TBX18O95935 607 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 CCDC192P0DO97 292 aa18.97■□□□□ 0.63
COL20A1-207ENST00000494913 CD19P15391 556 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms