RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 E2F8A0AVK6 867 aa24.66■■□□□ 1.54
COL27A1-208ENST00000494780 BCLAF3A2AJT9 711 aaKnown RBP24.66■■□□□ 1.54
COL27A1-208ENST00000494780 KLRC4O43908 158 aa24.66■■□□□ 1.54
COL27A1-208ENST00000494780 CLSTN1O94985 981 aa24.66■■□□□ 1.54
COL27A1-208ENST00000494780 HSP90AA1P07900 732 aaKnown RBP24.66■■□□□ 1.54
COL27A1-208ENST00000494780 SLFN14P0C7P3 912 aa24.66■■□□□ 1.54
COL27A1-208ENST00000494780 GBP1P32455 592 aa24.66■■□□□ 1.54
COL27A1-208ENST00000494780 CREB5Q02930 508 aa24.66■■□□□ 1.54
COL27A1-208ENST00000494780 HECTD3Q5T447 861 aa24.66■■□□□ 1.54
COL27A1-208ENST00000494780 SNX30Q5VWJ9 437 aa24.66■■□□□ 1.54
COL27A1-208ENST00000494780 PAQR9Q6ZVX9 377 aa24.66■■□□□ 1.54
COL27A1-208ENST00000494780 HSCBQ8IWL3 235 aa24.66■■□□□ 1.54
COL27A1-208ENST00000494780 OTUB2Q96DC9 234 aa24.66■■□□□ 1.54
COL27A1-208ENST00000494780 EXOC1Q9NV70 894 aa24.66■■□□□ 1.54
COL27A1-208ENST00000494780 SERTAD1Q9UHV2 236 aa24.66■■□□□ 1.54
COL27A1-208ENST00000494780 CNOT1A5YKK6 2376 aaKnown RBP24.65■■□□□ 1.54
COL27A1-208ENST00000494780 A0A0A0MRY4 1105 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 TNFRSF10BO14763 440 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 SCAMP3O14828 347 aaKnown RBP24.65■■□□□ 1.54
COL27A1-208ENST00000494780 COCHO43405 550 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 VNN1O95497 513 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 CAVIN2O95810 425 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 APODP05090 189 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 ADH5P11766 374 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 KCNA4P22459 653 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 SLC6A11P48066 632 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 TUBP50607 506 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 SLC5A3P53794 718 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 STK4Q13043 487 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 CRY1Q16526 586 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 HSF5Q4G112 596 aaPredicted RBP24.65■■□□□ 1.54
COL27A1-208ENST00000494780 ANO7Q6IWH7 933 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 CCDC33Q8N5R6 958 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 KIAA0895Q8NCT3 520 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 SCAMP5Q8TAC9 235 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 SMARCD1Q96GM5 515 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 TPSD1Q9BZJ3 242 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 CHORDC1Q9UHD1 332 aaPredicted RBP24.65■■□□□ 1.54
COL27A1-208ENST00000494780 RCOR1Q9UKL0 485 aa24.65■■□□□ 1.54
COL27A1-208ENST00000494780 ANTXRLA6NF34 631 aa24.64■■□□□ 1.54
COL27A1-208ENST00000494780 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.64■■□□□ 1.54
COL27A1-208ENST00000494780 ACTN4O43707 911 aaKnown RBP24.64■■□□□ 1.54
COL27A1-208ENST00000494780 ALDH1A2O94788 518 aa24.64■■□□□ 1.54
COL27A1-208ENST00000494780 KAT7O95251 611 aa24.64■■□□□ 1.54
COL27A1-208ENST00000494780 P4HA1P13674 534 aa24.64■■□□□ 1.54
COL27A1-208ENST00000494780 PMS2CLQ68D20 193 aa24.64■■□□□ 1.54
COL27A1-208ENST00000494780 RNF43Q68DV7 783 aa24.64■■□□□ 1.54
COL27A1-208ENST00000494780 SCARA5Q6ZMJ2 495 aa24.64■■□□□ 1.54
COL27A1-208ENST00000494780 PAGE5Q96GU1 130 aa24.64■■□□□ 1.54
COL27A1-208ENST00000494780 ZFRQ96KR1 1074 aaKnown RBP24.64■■□□□ 1.54
COL27A1-208ENST00000494780 SDCBP2Q9H190 292 aa24.64■■□□□ 1.54
COL27A1-208ENST00000494780 INVSQ9Y283 1065 aa24.64■■□□□ 1.54
COL27A1-208ENST00000494780 CACNA1BQ00975 2339 aa24.63■■□□□ 1.53
COL27A1-208ENST00000494780 FAM92AA1XBS5 289 aa24.63■■□□□ 1.53
COL27A1-208ENST00000494780 PDXKO00764 312 aa24.63■■□□□ 1.53
COL27A1-208ENST00000494780 AP1G2O75843 785 aa24.63■■□□□ 1.53
COL27A1-208ENST00000494780 RPN1P04843 607 aaKnown RBP24.63■■□□□ 1.53
COL27A1-208ENST00000494780 GRIA2P42262 883 aa24.63■■□□□ 1.53
COL27A1-208ENST00000494780 DNM1Q05193 864 aaKnown RBP24.63■■□□□ 1.53
COL27A1-208ENST00000494780 SGSM1Q2NKQ1 1148 aa24.63■■□□□ 1.53
COL27A1-208ENST00000494780 TCEAL6Q6IPX3 200 aa24.63■■□□□ 1.53
COL27A1-208ENST00000494780 C12orf40Q86WS4 652 aa24.63■■□□□ 1.53
COL27A1-208ENST00000494780 FUKQ8N0W3 1084 aa24.63■■□□□ 1.53
COL27A1-208ENST00000494780 MDGA1Q8NFP4 955 aa24.63■■□□□ 1.53
COL27A1-208ENST00000494780 TAF4BQ92750 862 aa24.63■■□□□ 1.53
COL27A1-208ENST00000494780 TCEAL3Q969E4 200 aa24.63■■□□□ 1.53
COL27A1-208ENST00000494780 DUSP9Q99956 384 aaKnown RBP24.63■■□□□ 1.53
COL27A1-208ENST00000494780 LSM14BQ9BX40 385 aaKnown RBP24.63■■□□□ 1.53
COL27A1-208ENST00000494780 KCTD10Q9H3F6 313 aa24.63■■□□□ 1.53
COL27A1-208ENST00000494780 ARHGEF4Q9NR80 690 aa24.63■■□□□ 1.53
COL27A1-208ENST00000494780 SH3BP1Q9Y3L3 701 aa24.63■■□□□ 1.53
COL27A1-208ENST00000494780 ZDHHC11BP0C7U3 371 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 CHRM1P11229 460 aaPredicted RBP24.62■■□□□ 1.53
COL27A1-208ENST00000494780 TNFRSF4P43489 277 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 GAD2Q05329 585 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 MESP2Q0VG99 397 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 ZACNQ401N2 412 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 KMT5BQ4FZB7 885 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 LY6G5CQ5SRR4 150 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 TMEM92Q6UXU6 159 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 ACOT1Q86TX2 421 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 SFTPA1Q8IWL2 248 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 CRYBG2Q8N1P7 616 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 ALLCQ8N6M5 410 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 IL17RCQ8NAC3 791 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 TXNDC5Q8NBS9 432 aaKnown RBP24.62■■□□□ 1.53
COL27A1-208ENST00000494780 TMC2Q8TDI7 906 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 EDEM2Q9BV94 578 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 KRT82Q9NSB4 513 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 GMIPQ9P107 970 aa24.62■■□□□ 1.53
COL27A1-208ENST00000494780 KLF8O95600 359 aaPredicted RBP24.61■■□□□ 1.53
COL27A1-208ENST00000494780 NR3C1P04150 777 aa24.61■■□□□ 1.53
COL27A1-208ENST00000494780 TIE1P35590 1138 aa24.61■■□□□ 1.53
COL27A1-208ENST00000494780 KIR2DL1P43626 348 aaPredicted RBP24.61■■□□□ 1.53
COL27A1-208ENST00000494780 DLG4P78352 724 aa24.61■■□□□ 1.53
COL27A1-208ENST00000494780 EOGTQ5NDL2 527 aa24.61■■□□□ 1.53
COL27A1-208ENST00000494780 N4BP2L1Q5TBK1 243 aaPredicted RBP24.61■■□□□ 1.53
COL27A1-208ENST00000494780 UNC93AQ86WB7 457 aa24.61■■□□□ 1.53
COL27A1-208ENST00000494780 OLIG1Q8TAK6 271 aa24.61■■□□□ 1.53
COL27A1-208ENST00000494780 ELMO3Q96BJ8 720 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms