RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 SLC6A3Q01959 620 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 DUSP4Q13115 394 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 SMC1AQ14683 1233 aaKnown RBP12.72□□□□□ -0.37
BRD3-206ENST00000494743 IFI16Q16666 785 aaKnown RBP12.72□□□□□ -0.37
BRD3-206ENST00000494743 PPP2R2DQ66LE6 453 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 SLC26A9Q7LBE3 791 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 BHLHA9Q7RTU4 235 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 ALYREFQ86V81 257 aaKnown RBP12.72□□□□□ -0.37
BRD3-206ENST00000494743 SCUBE3Q8IX30 993 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 SCML4Q8N228 414 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 TRIM58Q8NG06 486 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 CLEC4CQ8WTT0 213 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 KHSRPQ92945 711 aaKnown RBP eCLIP12.72□□□□□ -0.37
BRD3-206ENST00000494743 SPATA17Q96L03 361 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 TRIM7Q9C029 511 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 NGRNQ9NPE2 291 aaKnown RBP12.72□□□□□ -0.37
BRD3-206ENST00000494743 CNGB3Q9NQW8 809 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 ENTPD7Q9NQZ7 604 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 TMEM59LQ9UK28 342 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 MAFFQ9ULX9 164 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 PLXNA4Q9HCM2 1894 aa12.72□□□□□ -0.37
BRD3-206ENST00000494743 REV3LO60673 3130 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 COL4A4P53420 1690 aaPredicted RBP12.71□□□□□ -0.37
BRD3-206ENST00000494743 GOLGA8SH3BPF8 625 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 BUB1BO60566 1050 aaPredicted RBP12.71□□□□□ -0.37
BRD3-206ENST00000494743 PALMO75781 387 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 SOAT2O75908 522 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 FBXO21O94952 628 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 SEC24AO95486 1093 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 ADH1AP07327 375 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 KRT3P12035 628 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 ATF6P18850 670 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 IRS1P35568 1242 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 NOP2P46087 812 aaKnown RBP12.71□□□□□ -0.37
BRD3-206ENST00000494743 DAOAP59103 153 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 MRPS5P82675 430 aaKnown RBP12.71□□□□□ -0.37
BRD3-206ENST00000494743 ZNF252P-AS1Q0IIN9 211 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 GPM6BQ13491 265 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 GRIN2CQ14957 1233 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 TAF5Q15542 800 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 DDR2Q16832 855 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 MGAT5BQ3V5L5 792 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 ZNF569Q5MCW4 686 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 FAM102AQ5T9C2 384 aaPredicted RBP12.71□□□□□ -0.37
BRD3-206ENST00000494743 PLPP4Q5VZY2 271 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 PM20D1Q6GTS8 502 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 OR6B2Q6IFH4 312 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 C11orf63Q6NUN7 778 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 LILRA6Q6PI73 481 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 ARCQ7LC44 396 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 SLFN11Q7Z7L1 901 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 SCN4BQ8IWT1 228 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 SIX6OS1Q8N1H7 587 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 JOSD2Q8TAC2 188 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 SCAMP5Q8TAC9 235 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 FEZF2Q8TBJ5 459 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 FNIP1Q8TF40 1166 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 PPM1EQ8WY54 764 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 CEP295NLQ96MC4 621 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 MCEEQ96PE7 176 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 KLHL5Q96PQ7 755 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 WDR24Q96S15 920 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 SEPT5Q99719 369 aaPredicted RBP12.71□□□□□ -0.37
BRD3-206ENST00000494743 SELENOOQ9BVL4 669 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 EMILIN2Q9BXX0 1053 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 ULBP1Q9BZM6 244 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 LRRC4Q9HBW1 653 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 METTL5Q9NRN9 209 aaKnown RBP12.71□□□□□ -0.37
BRD3-206ENST00000494743 ASNSD1Q9NWL6 643 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 IL37Q9NZH6 218 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 ANAPC7Q9UJX3 599 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 SLC27A5Q9Y2P5 690 aa12.71□□□□□ -0.37
BRD3-206ENST00000494743 PTPRDP23468 1912 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 FAM92AA1XBS5 289 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 EPOPA6NHQ4 379 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 TGM5O43548 720 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 ZBED1O96006 694 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 C1RP00736 705 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 RFC1P35251 1148 aaPredicted RBP12.7□□□□□ -0.38
BRD3-206ENST00000494743 TUFMP49411 452 aaKnown RBP12.7□□□□□ -0.38
BRD3-206ENST00000494743 NAP1L1P55209 391 aaKnown RBP12.7□□□□□ -0.38
BRD3-206ENST00000494743 GNG11P61952 73 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 RPL10AP62906 217 aaKnown RBP12.7□□□□□ -0.38
BRD3-206ENST00000494743 OGDHQ02218 1023 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 SDHAF4Q5VUM1 108 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 PDE12Q6L8Q7 609 aaKnown RBP12.7□□□□□ -0.38
BRD3-206ENST00000494743 TRNP1Q6NT89 227 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 TCEAL8Q8IYN2 117 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 SLC35F6Q8N357 371 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 IRGQQ8WZA9 623 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 BTBD6Q96KE9 485 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 ALS2CR12Q96Q35 445 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 LRFN3Q9BTN0 628 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 LMAN2LQ9H0V9 348 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 CERS4Q9HA82 394 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 SLC28A3Q9HAS3 691 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 YIPF1Q9Y548 306 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 CACNA1AO00555 2505 aa12.7□□□□□ -0.38
BRD3-206ENST00000494743 TCF20Q9UGU0 1960 aaKnown RBP12.7□□□□□ -0.38
BRD3-206ENST00000494743 GBF1Q92538 1859 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms