RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 DRD1P21728 446 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 NR2F2P24468 414 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 PIK3CAP42336 1068 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 GCLMP48507 274 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 CCDC6Q16204 474 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.36□□□□□ -0.43
VTI1A-208ENST00000494728 KBTBD6Q86V97 674 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 NUP93Q8N1F7 819 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 SLC2A14Q8TDB8 520 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 TMC2Q8TDI7 906 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 FBXO32Q969P5 355 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 EEF2KMTQ96G04 330 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 SMARCD1Q96GM5 515 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 CCSER2Q9H7U1 834 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 IL37Q9NZH6 218 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 GMIPQ9P107 970 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 CFAP97Q9P2B7 532 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 USP25Q9UHP3 1055 aa12.36□□□□□ -0.43
VTI1A-208ENST00000494728 PI4KAP42356 2102 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 ZZEF1O43149 2961 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 A0A1W2PQ27 194 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 A0A1W2PQ64 194 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 A0A1W2PQD8 194 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 FAM92AA1XBS5 289 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 K7EQS6 105 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 GDF9O60383 454 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 AP1G2O75843 785 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 MYL1P05976 194 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 ZDHHC11BP0C7U3 371 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 HNRNPLP14866 589 aaKnown RBP eCLIP12.35□□□□□ -0.43
VTI1A-208ENST00000494728 PFKLP17858 780 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 YWHAQP27348 245 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 SLC6A11P48066 632 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 AP3M2P53677 418 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 ATXN1P54253 815 aaKnown RBP12.35□□□□□ -0.43
VTI1A-208ENST00000494728 SEC13P55735 322 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 FOXK2Q01167 660 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 PUM1Q14671 1186 aaKnown RBP eCLIP12.35□□□□□ -0.43
VTI1A-208ENST00000494728 SECISBP2LQ93073 1101 aaKnown RBP12.35□□□□□ -0.43
VTI1A-208ENST00000494728 SLITRK1Q96PX8 696 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 MED10Q9BTT4 135 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 SMOC1Q9H4F8 434 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 MMRN2Q9H8L6 949 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 DMAP1Q9NPF5 467 aaPredicted RBP12.35□□□□□ -0.43
VTI1A-208ENST00000494728 ZDHHC4Q9NPG8 344 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 SEMA4GQ9NTN9 838 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 CHORDC1Q9UHD1 332 aaPredicted RBP12.35□□□□□ -0.43
VTI1A-208ENST00000494728 RAB23Q9ULC3 237 aa12.35□□□□□ -0.43
VTI1A-208ENST00000494728 CFAP47Q6ZTR5 3102 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 HHLA1C9JL84 531 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 DCLK1O15075 740 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 RPP40O75818 363 aaKnown RBP12.34□□□□□ -0.43
VTI1A-208ENST00000494728 NFATC1O95644 943 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 MBL2P11226 248 aaPredicted RBP12.34□□□□□ -0.43
VTI1A-208ENST00000494728 ADORA2BP29275 332 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 CNR2P34972 360 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 PDE6CP51160 858 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 VAMP7P51809 220 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 MAP3K7CLP57077 242 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 LMNB2Q03252 620 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 INCA1Q0VD86 236 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 PNOCQ13519 176 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 DMC1Q14565 340 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 DHCR24Q15392 516 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 NFIL3Q16649 462 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 SGSM1Q2NKQ1 1148 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 RHBDF2Q6PJF5 856 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 PRR23CQ6ZRP0 262 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 CLEC20AQ6ZU45 233 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 CEP68Q76N32 757 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 SYT13Q7L8C5 426 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 GUF1Q8N442 669 aaKnown RBP12.34□□□□□ -0.43
VTI1A-208ENST00000494728 USP33Q8TEY7 942 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 WHAMMQ8TF30 809 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 GAB3Q8WWW8 586 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 SEMA4DQ92854 862 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 ERCC4Q92889 916 aaPredicted RBP12.34□□□□□ -0.43
VTI1A-208ENST00000494728 JAKMIP2Q96AA8 810 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 TNIP3Q96KP6 325 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 CSNK1G1Q9HCP0 422 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 RXFP3Q9NSD7 469 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 OSER1Q9NX31 292 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 SLC8A2Q9UPR5 921 aa12.34□□□□□ -0.43
VTI1A-208ENST00000494728 IGF2RP11717 2491 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 DCDC2BA2VCK2 349 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 IKBKBO14920 756 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 MAPK13O15264 365 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 CYP26A1O43174 497 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 CALUO43852 315 aaPredicted RBP12.33□□□□□ -0.44
VTI1A-208ENST00000494728 GREM1O60565 184 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 ZNF202O95125 648 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 RTN3O95197 1032 aaPredicted RBP12.33□□□□□ -0.44
VTI1A-208ENST00000494728 IRF1P10914 325 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 CD58P19256 250 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 PPP3CCP48454 512 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 KDSRQ06136 332 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 SF3A2Q15428 464 aaKnown RBP12.33□□□□□ -0.44
VTI1A-208ENST00000494728 FBXO43Q4G163 708 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 C2orf27AQ580R0 203 aa12.33□□□□□ -0.44
VTI1A-208ENST00000494728 SNX30Q5VWJ9 437 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms