RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 IGDCC4Q8TDY8 1250 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 SEPT1Q8WYJ6 367 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 EDAQ92838 391 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 CUL5Q93034 780 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 ZNF689Q96CS4 500 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-219ENST00000494323 RRP36Q96EU6 259 aaKnown RBP5.86□□□□□ -1.47
PTCD3-219ENST00000494323 SENP7Q9BQF6 1050 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 CNTD2Q9H8S5 307 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 PSTPIP2Q9H939 334 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 MBD1Q9UIS9 605 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-219ENST00000494323 CD207Q9UJ71 328 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 CDY2AQ9Y6F7 541 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 ATG2AQ2TAZ0 1938 aa5.86□□□□□ -1.47
PTCD3-219ENST00000494323 ADGRA3Q8IWK6 1321 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 MBLAC1A4D2B0 266 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-219ENST00000494323 ACOT7O00154 380 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 ABLIM3O94929 683 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 LRG1P02750 347 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 KCNA2P16389 499 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 RXRAP19793 462 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 NDUFV1P49821 464 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 SESN3P58005 492 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 ANTXR2P58335 489 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 MRPS6P82932 125 aaKnown RBP5.85□□□□□ -1.47
PTCD3-219ENST00000494323 MGAT3Q09327 533 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 SMAD4Q13485 552 aaKnown RBP5.85□□□□□ -1.47
PTCD3-219ENST00000494323 UBE2SQ16763 222 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 TMEM266Q2M3C6 531 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 HERC4Q5GLZ8 1057 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-219ENST00000494323 TAF2Q6P1X5 1199 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 TEPPQ6URK8 271 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 RALYLQ86SE5 291 aaKnown RBP5.85□□□□□ -1.47
PTCD3-219ENST00000494323 RAB11FIP4Q86YS3 637 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 ZZZ3Q8IYH5 903 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 SRBD1Q8N5C6 995 aaKnown RBP5.85□□□□□ -1.47
PTCD3-219ENST00000494323 GIMAP8Q8ND71 665 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-219ENST00000494323 NCOA7Q8NI08 942 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 EXOC6Q8TAG9 804 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 CYP2W1Q8TAV3 490 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 MZB1Q8WU39 189 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 TRAPPC12Q8WVT3 735 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 POF1BQ8WVV4 589 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 MSLNLQ96KJ4 702 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 RPGRIP1Q96KN7 1286 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 PCYT2Q99447 389 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 ELF4Q99607 663 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-219ENST00000494323 KRTAP4-11Q9BYQ6 195 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 LMAN2LQ9H0V9 348 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 MS4A5Q9H3V2 200 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 SMARCAD1Q9H4L7 1026 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 TLE6Q9H808 572 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 ERAP1Q9NZ08 941 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 ZIM2Q9NZV7 527 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 TUBE1Q9UJT0 475 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 PADI3Q9ULW8 664 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 BARX2Q9UMQ3 279 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-219ENST00000494323 GINS2Q9Y248 185 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 PCDHA5Q9Y5H7 936 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 EVPLQ92817 2033 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 RIF1Q5UIP0 2472 aaKnown RBP5.85□□□□□ -1.47
PTCD3-219ENST00000494323 CACNA1HO95180 2353 aa5.85□□□□□ -1.47
PTCD3-219ENST00000494323 RALGAPA2Q2PPJ7 1873 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-219ENST00000494323 TMEM221A6NGB7 291 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 RRN3P2A6NIE6 340 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 M0R296 226 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 PLEKHA8P1O95397 391 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 MMP1P03956 469 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 SLC9A1P19634 815 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 SP100P23497 879 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-219ENST00000494323 CHMLP26374 656 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 STAT5AP42229 794 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 CDR1P51861 262 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 PHC1P78364 1004 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 ZXDAP98168 799 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 DBPQ10586 325 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-219ENST00000494323 FAPQ12884 760 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 TERF2Q15554 542 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 CR1LQ2VPA4 569 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 SPOUT1Q5T280 376 aaKnown RBP5.84□□□□□ -1.47
PTCD3-219ENST00000494323 GPR158Q5T848 1215 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 FAM102BQ5T8I3 360 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 BROXQ5VW32 411 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 XRRA1Q6P2D8 792 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 CD300LDQ6UXZ3 194 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 TSHZ1Q6ZSZ6 1077 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 TRMT1LQ7Z2T5 733 aaKnown RBP5.84□□□□□ -1.47
PTCD3-219ENST00000494323 B3GNT8Q7Z7M8 397 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 ZBTB46Q86UZ6 589 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 PRSS33Q8NF86 280 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 CTCFLQ8NI51 663 aaPredicted RBP5.84□□□□□ -1.47
PTCD3-219ENST00000494323 P2RX5Q93086 422 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 RELTQ969Z4 430 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 APOL5Q9BWW9 433 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 RHOBTB2Q9BYZ6 727 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 KCNH6Q9H252 994 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 ZMAT4Q9H898 229 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 GABBR1Q9UBS5 961 aa5.84□□□□□ -1.47
PTCD3-219ENST00000494323 SEC63Q9UGP8 760 aaKnown RBP5.84□□□□□ -1.47
PTCD3-219ENST00000494323 PCDHA6Q9UN73 950 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms