RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 PITX1P78337 314 aaPredicted RBP12.97□□□□□ -0.33
PHF3-205ENST00000494284 GRM1Q13255 1194 aa12.97□□□□□ -0.33
PHF3-205ENST00000494284 PIGHQ14442 188 aaPredicted RBP12.97□□□□□ -0.33
PHF3-205ENST00000494284 ZNF484Q5JVG2 852 aa12.97□□□□□ -0.33
PHF3-205ENST00000494284 RNASEH2BQ5TBB1 312 aaKnown RBP12.97□□□□□ -0.33
PHF3-205ENST00000494284 TRABD2AQ86V40 505 aa12.97□□□□□ -0.33
PHF3-205ENST00000494284 ARRDC4Q8NCT1 418 aa12.97□□□□□ -0.33
PHF3-205ENST00000494284 OR6B3Q8NGW1 331 aa12.97□□□□□ -0.33
PHF3-205ENST00000494284 SPATA18Q8TC71 538 aa12.97□□□□□ -0.33
PHF3-205ENST00000494284 KCNN1Q92952 543 aa12.97□□□□□ -0.33
PHF3-205ENST00000494284 ZFP42Q96MM3 310 aa12.97□□□□□ -0.33
PHF3-205ENST00000494284 SMC6Q96SB8 1091 aa12.97□□□□□ -0.33
PHF3-205ENST00000494284 KLHL14Q9P2G3 628 aa12.97□□□□□ -0.33
PHF3-205ENST00000494284 LCP1P13796 627 aa12.96□□□□□ -0.33
PHF3-205ENST00000494284 RPL22P35268 128 aaKnown RBP12.96□□□□□ -0.33
PHF3-205ENST00000494284 MYO1EQ12965 1108 aa12.96□□□□□ -0.33
PHF3-205ENST00000494284 STAT4Q14765 748 aa12.96□□□□□ -0.33
PHF3-205ENST00000494284 LVRNQ6Q4G3 990 aa12.96□□□□□ -0.33
PHF3-205ENST00000494284 SYDE1Q6ZW31 735 aaPredicted RBP12.96□□□□□ -0.33
PHF3-205ENST00000494284 KCNV2Q8TDN2 545 aa12.96□□□□□ -0.33
PHF3-205ENST00000494284 FBF1Q8TES7 1133 aa12.96□□□□□ -0.33
PHF3-205ENST00000494284 CPT1BQ92523 772 aa12.96□□□□□ -0.33
PHF3-205ENST00000494284 ETNK1Q9HBU6 452 aa12.96□□□□□ -0.33
PHF3-205ENST00000494284 NPHS2Q9NP85 383 aa12.96□□□□□ -0.33
PHF3-205ENST00000494284 SLC17A7Q9P2U7 560 aa12.96□□□□□ -0.33
PHF3-205ENST00000494284 HAO1Q9UJM8 370 aa12.96□□□□□ -0.33
PHF3-205ENST00000494284 PHTF1Q9UMS5 762 aa12.96□□□□□ -0.33
PHF3-205ENST00000494284 CLUHO75153 1309 aa12.96□□□□□ -0.33
PHF3-205ENST00000494284 CLDN5O00501 218 aa12.96□□□□□ -0.34
PHF3-205ENST00000494284 GAS2O43903 313 aaKnown RBP12.96□□□□□ -0.34
PHF3-205ENST00000494284 RECQL4O94761 1208 aa12.96□□□□□ -0.34
PHF3-205ENST00000494284 CBX6O95503 412 aa12.96□□□□□ -0.34
PHF3-205ENST00000494284 F7P08709 466 aaPredicted RBP12.96□□□□□ -0.34
PHF3-205ENST00000494284 RBP3P10745 1247 aa12.96□□□□□ -0.34
PHF3-205ENST00000494284 MCF2P10911 925 aa12.96□□□□□ -0.34
PHF3-205ENST00000494284 SLC26A2P50443 739 aa12.96□□□□□ -0.34
PHF3-205ENST00000494284 IL9RQ01113 521 aa12.96□□□□□ -0.34
PHF3-205ENST00000494284 CAV1Q03135 178 aa12.96□□□□□ -0.34
PHF3-205ENST00000494284 CROCCP2Q86T23 111 aa12.96□□□□□ -0.34
PHF3-205ENST00000494284 VSIG1Q86XK7 387 aa12.96□□□□□ -0.34
PHF3-205ENST00000494284 PYROXD2Q8N2H3 581 aa12.96□□□□□ -0.34
PHF3-205ENST00000494284 CEP41Q9BYV8 373 aa12.96□□□□□ -0.34
PHF3-205ENST00000494284 PIN4Q9Y237 131 aaKnown RBP12.96□□□□□ -0.34
PHF3-205ENST00000494284 ZNF638Q14966 1978 aaKnown RBP12.96□□□□□ -0.34
PHF3-205ENST00000494284 IL18RAPO95256 599 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 SMIM10L2AP0DMW4 78 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 SMIM10L2BP0DMW5 78 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 YARSP54577 528 aaKnown RBP12.95□□□□□ -0.34
PHF3-205ENST00000494284 EIF3EP60228 445 aaKnown RBP12.95□□□□□ -0.34
PHF3-205ENST00000494284 CCDC14Q49A88 953 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 HHATQ5VTY9 493 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 CENPUQ71F23 418 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.95□□□□□ -0.34
PHF3-205ENST00000494284 PALM2Q8IXS6 379 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 AGGF1Q8N302 714 aaeCLIP12.95□□□□□ -0.346e-8■■■■■ 28.7
PHF3-205ENST00000494284 SLC35B2Q8TB61 432 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 MYLK2Q9H1R3 596 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 XPO7Q9UIA9 1087 aaKnown RBP12.95□□□□□ -0.34
PHF3-205ENST00000494284 ARL2BPQ9Y2Y0 163 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 TIMM13Q9Y5L4 95 aaPredicted RBP12.95□□□□□ -0.34
PHF3-205ENST00000494284 CDH23Q9H251 3354 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 MYADML2A6NDP7 307 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 GPR32O75388 356 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 TRUB2O95900 331 aaKnown RBP12.95□□□□□ -0.34
PHF3-205ENST00000494284 NEFHP12036 1026 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 COPS2P61201 443 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 TNFAIP2Q03169 654 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 SEPT7Q16181 437 aaKnown RBP12.95□□□□□ -0.34
PHF3-205ENST00000494284 SOWAHAQ2M3V2 549 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 AGAP11Q8TF27 550 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 KHSRPQ92945 711 aaKnown RBP eCLIP12.95□□□□□ -0.341e-6■■■□□ 17.4
PHF3-205ENST00000494284 ADAMTS10Q9H324 1103 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 CCDC134Q9H6E4 229 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 BARX2Q9UMQ3 279 aaPredicted RBP12.95□□□□□ -0.34
PHF3-205ENST00000494284 SCN4AP35499 1836 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 PAPSS1O43252 624 aaPredicted RBP12.95□□□□□ -0.34
PHF3-205ENST00000494284 DNAJC8O75937 253 aaPredicted RBP12.95□□□□□ -0.34
PHF3-205ENST00000494284 OAS1P00973 400 aaKnown RBP12.95□□□□□ -0.34
PHF3-205ENST00000494284 HMGCRP04035 888 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 MAP2K2P36507 400 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 YWHAGP61981 247 aaKnown RBP eCLIP12.95□□□□□ -0.34
PHF3-205ENST00000494284 SURF1Q15526 300 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 DUSP28Q4G0W2 176 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 DARS2Q6PI48 645 aaKnown RBP12.95□□□□□ -0.34
PHF3-205ENST00000494284 CTAGE3PQ8IX95 158 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 CFAP36Q96G28 342 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 MAGEB18Q96M61 343 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 RRAGCQ9HB90 399 aa12.95□□□□□ -0.34
PHF3-205ENST00000494284 IQCA1LA6NCM1 817 aa12.94□□□□□ -0.34
PHF3-205ENST00000494284 H7C0C1 242 aa12.94□□□□□ -0.34
PHF3-205ENST00000494284 BEST1O76090 585 aa12.94□□□□□ -0.34
PHF3-205ENST00000494284 CYP2C9P11712 490 aa12.94□□□□□ -0.34
PHF3-205ENST00000494284 NQO1P15559 274 aaKnown RBP12.94□□□□□ -0.34
PHF3-205ENST00000494284 ATP5OP48047 213 aa12.94□□□□□ -0.34
PHF3-205ENST00000494284 CCNA1P78396 465 aa12.94□□□□□ -0.34
PHF3-205ENST00000494284 TP53INP2Q8IXH6 220 aa12.94□□□□□ -0.34
PHF3-205ENST00000494284 BBOF1Q8ND07 529 aa12.94□□□□□ -0.34
PHF3-205ENST00000494284 LRRC8CQ8TDW0 803 aa12.94□□□□□ -0.34
PHF3-205ENST00000494284 FAM172AQ8WUF8 416 aa12.94□□□□□ -0.34
PHF3-205ENST00000494284 PAFAH2Q99487 392 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms