RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 DHX36Q9H2U1 1008 aaKnown RBP4.54□□□□□ -1.68
CD46-217ENST00000493796 HDAC9Q9UKV0 1011 aa4.54□□□□□ -1.68
CD46-217ENST00000493796 CLASP1Q7Z460 1538 aa4.53□□□□□ -1.68
CD46-217ENST00000493796 CD3EAPO15446 510 aaKnown RBP4.53□□□□□ -1.68
CD46-217ENST00000493796 RASAL1O95294 804 aa4.53□□□□□ -1.68
CD46-217ENST00000493796 NHLRC4P0CG21 123 aaPredicted RBP4.53□□□□□ -1.68
CD46-217ENST00000493796 RPL17P18621 184 aaKnown RBP4.53□□□□□ -1.68
CD46-217ENST00000493796 PRKAR1BP31321 381 aa4.53□□□□□ -1.68
CD46-217ENST00000493796 PTDSS1P48651 473 aaKnown RBP4.53□□□□□ -1.68
CD46-217ENST00000493796 HOXA4Q00056 320 aaPredicted RBP4.53□□□□□ -1.68
CD46-217ENST00000493796 E2F1Q01094 437 aa4.53□□□□□ -1.68
CD46-217ENST00000493796 SRSF4Q08170 494 aaKnown RBP4.53□□□□□ -1.68
CD46-217ENST00000493796 SLC29A2Q14542 456 aa4.53□□□□□ -1.68
CD46-217ENST00000493796 TMEM119Q4V9L6 283 aa4.53□□□□□ -1.68
CD46-217ENST00000493796 ZKSCAN2Q63HK3 967 aa4.53□□□□□ -1.68
CD46-217ENST00000493796 FCRL6Q6DN72 434 aa4.53□□□□□ -1.68
CD46-217ENST00000493796 ZNF782Q6ZMW2 699 aaPredicted RBP4.53□□□□□ -1.68
CD46-217ENST00000493796 DPY19L3Q6ZPD9 716 aa4.53□□□□□ -1.68
CD46-217ENST00000493796 PRR25Q96S07 402 aa4.53□□□□□ -1.68
CD46-217ENST00000493796 BTBD1Q9H0C5 482 aa4.53□□□□□ -1.68
CD46-217ENST00000493796 DDX21Q9NR30 783 aaKnown RBP eCLIP4.53□□□□□ -1.68
CD46-217ENST00000493796 FLRT1Q9NZU1 646 aa4.53□□□□□ -1.68
CD46-217ENST00000493796 DRG1Q9Y295 367 aaKnown RBP4.53□□□□□ -1.68
CD46-217ENST00000493796 PCDHGB6Q9Y5F9 930 aa4.53□□□□□ -1.68
CD46-217ENST00000493796 GRIN2BQ13224 1484 aa4.53□□□□□ -1.68
CD46-217ENST00000493796 LRRIQ1Q96JM4 1722 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 ERICH3Q5RHP9 1530 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 SMIM22K7EJ46 135 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 RGS10O43665 173 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 PDE8BO95263 885 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 PARNO95453 639 aaKnown RBP4.52□□□□□ -1.69
CD46-217ENST00000493796 LATS1O95835 1130 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 ACVR2AP27037 513 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 EPHA3P29320 983 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 UQCRC1P31930 480 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 CPT1AP50416 773 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 GRM1Q13255 1194 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 ZNF750Q32MQ0 723 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 L1TD1Q5T7N2 865 aaKnown RBP4.52□□□□□ -1.69
CD46-217ENST00000493796 PRAMEF17Q5VTA0 474 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 KIAA1614Q5VZ46 1190 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 TRIM72Q6ZMU5 477 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 YAF2Q8IY57 180 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 KRT78Q8N1N4 520 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 CYP2W1Q8TAV3 490 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 DDB2Q92466 427 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 TTC17Q96AE7 1141 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 DAZAP1Q96EP5 407 aaKnown RBP4.52□□□□□ -1.69
CD46-217ENST00000493796 NUP62CLQ9H1M0 184 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 MID2Q9UJV3 735 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 USP22Q9UPT9 525 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 CARMIL1Q5VZK9 1371 aa4.52□□□□□ -1.69
CD46-217ENST00000493796 GRIN2AQ12879 1464 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 TISP43B9A030 160 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 H7C1Q1 480 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 AP4M1O00189 453 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 RAB27BO00194 218 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 PSMD9O00233 223 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 PMPCBO75439 489 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 PIAS2O75928 621 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 CELA2AP08217 269 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 MYCLP12524 364 aaPredicted RBP4.51□□□□□ -1.69
CD46-217ENST00000493796 BTF3P20290 206 aaKnown RBP4.51□□□□□ -1.69
CD46-217ENST00000493796 FPR3P25089 353 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 GKP32189 559 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 CARSP49589 748 aaKnown RBP4.51□□□□□ -1.69
CD46-217ENST00000493796 ITGA8P53708 1063 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 TIRAPP58753 221 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 TUBA4AP68366 448 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 TIAL1Q01085 375 aaKnown RBP eCLIP4.51□□□□□ -1.69
CD46-217ENST00000493796 KIRREL2Q6UWL6 708 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 UNC13DQ70J99 1090 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 RAB11FIP4Q86YS3 637 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 SIRT6Q8N6T7 355 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 TERB1Q8NA31 727 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 IPCEF1Q8WWN9 437 aaPredicted RBP4.51□□□□□ -1.69
CD46-217ENST00000493796 SNX18Q96RF0 628 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 STRBPQ96SI9 672 aaKnown RBP4.51□□□□□ -1.69
CD46-217ENST00000493796 APOL5Q9BWW9 433 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 VN1R3Q9BXE9 311 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 DKK4Q9UBT3 224 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 ITGB1BP2Q9UKP3 347 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 AMFRQ9UKV5 643 aa4.51□□□□□ -1.69
CD46-217ENST00000493796 SHROOM2Q13796 1616 aa4.5□□□□□ -1.69
CD46-217ENST00000493796 NUP160Q12769 1436 aa4.5□□□□□ -1.69
CD46-217ENST00000493796 KIF27Q86VH2 1401 aa4.5□□□□□ -1.69
CD46-217ENST00000493796 AQP7P3A6NL99 342 aa4.5□□□□□ -1.69
CD46-217ENST00000493796 F8W8V4 182 aa4.5□□□□□ -1.69
CD46-217ENST00000493796 M0R3H8 397 aa4.5□□□□□ -1.69
CD46-217ENST00000493796 INMTO95050 263 aa4.5□□□□□ -1.69
CD46-217ENST00000493796 MT-ND5P03915 603 aa4.5□□□□□ -1.69
CD46-217ENST00000493796 HGFP14210 728 aa4.5□□□□□ -1.69
CD46-217ENST00000493796 TPH1P17752 444 aa4.5□□□□□ -1.69
CD46-217ENST00000493796 IL1R2P27930 398 aa4.5□□□□□ -1.69
CD46-217ENST00000493796 MTHFSP49914 203 aa4.5□□□□□ -1.69
CD46-217ENST00000493796 SUMO2P61956 95 aaKnown RBP4.5□□□□□ -1.69
CD46-217ENST00000493796 HTRA4P83105 476 aaPredicted RBP4.5□□□□□ -1.69
CD46-217ENST00000493796 PSG6Q00889 435 aa4.5□□□□□ -1.69
CD46-217ENST00000493796 RNASE12Q5GAN4 147 aaKnown RBP4.5□□□□□ -1.69
CD46-217ENST00000493796 ZNF66Q6ZN08 573 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms