RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 GSTK1Q9Y2Q3 226 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 SNX8Q9Y5X2 465 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 USP17L15C9J2P7 530 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 USP17L13C9JLJ4 530 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 USP17L11C9JVI0 530 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 USP17L18D6R9N7 530 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 USP17L22D6RA61 530 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 USP17L17D6RBQ6 530 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 USP17L19D6RCP7 530 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 USP17L20D6RJB6 530 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 KPNA5O15131 536 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 ATP9AO75110 1047 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 PGM3O95394 542 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 EYA4O95677 639 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 SPIRE1Q08AE8 756 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 USP17L24Q0WX57 530 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 MAD2L1Q13257 205 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-221ENST00000493795 ITGB3BPQ13352 177 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-221ENST00000493795 EPHA7Q15375 998 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 MGAT5BQ3V5L5 792 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 TTC23Q5W5X9 447 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 NEK5Q6P3R8 708 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 USP17L6PQ6QN14 398 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 CAPSLQ8WWF8 208 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 HAVCR1Q96D42 359 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 BDH2Q9BUT1 245 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 EPB41L4BQ9H329 900 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 DCLRE1BQ9H816 532 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 USP27XA6NNY8 438 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 CHURC1-FNTBB4DL54 471 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 KIF28PB7ZC32 967 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 CCNA2P20248 432 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 TIMM50Q3ZCQ8 353 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 TMED8Q6PL24 325 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-221ENST00000493795 CROCCP3Q8IVE0 287 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 CCDC36Q8IYA8 594 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 TRPV3Q8NET8 790 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 SLC20A1Q8WUM9 679 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 ISCUQ9H1K1 167 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 TMEM138Q9NPI0 162 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 EHD3Q9NZN3 535 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 ING4Q9UNL4 249 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 PCDHA10Q9Y5I2 948 aa8.11□□□□□ -1.11
BRCA1-221ENST00000493795 TEX33O43247 280 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 KCNA6P17658 529 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 PCSK1P29120 753 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 IL6STP40189 918 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 ALDH1A3P47895 512 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 GALCP54803 685 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 CORO7P57737 925 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 CYP24A1Q07973 514 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 DNAJC3Q13217 504 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 LPIN1Q14693 890 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 SMCO1Q147U7 214 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 PLCL1Q15111 1095 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 GOLGA7BQ2TAP0 167 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 C10orf120Q5SQS8 335 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 THOC7Q6I9Y2 204 aaKnown RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 FAM220AQ7Z4H9 259 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 PALB2Q86YC2 1186 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 FAM71DQ8N9W8 422 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 OR6J1Q8NGC5 347 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 SPPL2AQ8TCT8 520 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 KATNAL1Q9BW62 490 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 GANQ9H2C0 597 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 CAB39LQ9H9S4 337 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 SCUBE2Q9NQ36 999 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 ADPRHL2Q9NX46 363 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 ARHGAP28Q9P2N2 729 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 CRNNQ9UBG3 495 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 HAO1Q9UJM8 370 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 AAR2Q9Y312 384 aaKnown RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 COL17A1Q9UMD9 1497 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 CC2D2AQ9P2K1 1620 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 CCDC182A6NF36 153 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 USP17L10C9JJH3 530 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 RAD51CO43502 376 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 ECE2O60344 883 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 RBP1P09455 135 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 SLC2A3P11169 496 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 S100A1P23297 94 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 OVGP1Q12889 678 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 ZNF177Q13360 481 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 NCOA4Q13772 614 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 CCDC153Q494R4 210 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 OLFML2AQ68BL7 652 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 PDPK2PQ6A1A2 396 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 RPTNQ6XPR3 784 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 CHPFQ8IZ52 775 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 BLOC1S5Q8TDH9 187 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 FIG4Q92562 907 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 TMEM260Q9NX78 707 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 CHORDC1Q9UHD1 332 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-221ENST00000493795 N6AMT1Q9Y5N5 214 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 TMEM114B3SHH9 223 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 O00370 1275 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 KLHL41O60662 606 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 KPNA6O60684 536 aa8.1□□□□□ -1.11
BRCA1-221ENST00000493795 RARBP10826 455 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms