RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 BMPR1AP36894 532 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 TKTL1P51854 596 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 ZNF143P52747 638 aaPredicted RBP13.29□□□□□ -0.28
VPS52-220ENST00000493674 RABGGTBP53611 331 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 DAOAP59103 153 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 MRPS5P82675 430 aaKnown RBP13.29□□□□□ -0.28
VPS52-220ENST00000493674 PIGHQ14442 188 aaPredicted RBP13.29□□□□□ -0.28
VPS52-220ENST00000493674 TAF5Q15542 800 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 TPGS2Q68CL5 300 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 FAM109BQ6ICB4 259 aaPredicted RBP13.29□□□□□ -0.28
VPS52-220ENST00000493674 DCUN1D2Q6PH85 259 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 RNF19BQ6ZMZ0 732 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 VPS52Q8N1B4 723 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 KLHL23Q8NBE8 558 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 IRGQQ8WZA9 623 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 OSBPL9Q96SU4 736 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 LRRC4Q9HBW1 653 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.29□□□□□ -0.28
VPS52-220ENST00000493674 ABI2Q9NYB9 513 aaPredicted RBP13.29□□□□□ -0.28
VPS52-220ENST00000493674 CDC23Q9UJX2 597 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 IRAK3Q9Y616 596 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 SAR1BQ9Y6B6 198 aa13.29□□□□□ -0.28
VPS52-220ENST00000493674 FAM92AA1XBS5 289 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 SART1O43290 800 aaKnown RBP13.28□□□□□ -0.28
VPS52-220ENST00000493674 HSF2BPO75031 334 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 DAB1O75553 588 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 LCP1P13796 627 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 TCP1P17987 556 aaKnown RBP13.28□□□□□ -0.28
VPS52-220ENST00000493674 GPD1P21695 349 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 PTPN9P43378 593 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 NDUFV1P49821 464 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 PEX5P50542 639 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 CREMQ03060 361 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 RAB33AQ14088 237 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 ACAP1Q15027 740 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 RPS6KA1Q15418 735 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 EFHC1Q5JVL4 640 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 DCAF12L1Q5VU92 463 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 BNIPLQ7Z465 357 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 SIX6OS1Q8N1H7 587 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 TTC9BQ8N6N2 239 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 ARFGAP1Q8N6T3 406 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 EMC1Q8N766 993 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 ATAD1Q8NBU5 361 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.28□□□□□ -0.28
VPS52-220ENST00000493674 NT5C3BQ969T7 300 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 SPATA17Q96L03 361 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 CEP295NLQ96MC4 621 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 SLC2A13Q96QE2 648 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 CNPY3Q9BT09 278 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 ULBP1Q9BZM6 244 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 AFF4Q9UHB7 1163 aaKnown RBP13.28□□□□□ -0.28
VPS52-220ENST00000493674 MAFFQ9ULX9 164 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 PACSIN2Q9UNF0 486 aaPredicted RBP13.28□□□□□ -0.28
VPS52-220ENST00000493674 PCDHA11Q9Y5I1 949 aa13.28□□□□□ -0.28
VPS52-220ENST00000493674 NUP210Q8TEM1 1887 aaPredicted RBP13.27□□□□□ -0.28
VPS52-220ENST00000493674 CHD5Q8TDI0 1954 aa13.27□□□□□ -0.28
VPS52-220ENST00000493674 CCDC66A2RUB6 948 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 TMEM110-MUSTN1A8MSY1 372 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 PSTPIP1O43586 416 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 URI1O94763 535 aaPredicted RBP13.27□□□□□ -0.29
VPS52-220ENST00000493674 FYNP06241 537 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 RB1P06400 928 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 RPL17P18621 184 aaKnown RBP13.27□□□□□ -0.29
VPS52-220ENST00000493674 OR1D2P34982 312 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 CTNNB1P35222 781 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 MARCKSL1P49006 195 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 CDR1P51861 262 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 TAS2R40P59535 323 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 KRT17Q04695 432 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 UBE3AQ05086 875 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 LRRC38Q5VT99 294 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 OTUD1Q5VV17 481 aaPredicted RBP13.27□□□□□ -0.29
VPS52-220ENST00000493674 KIAA1841Q6NSI8 718 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 BEND5Q7L4P6 421 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 ZNF461Q8TAF7 563 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 RXFP2Q8WXD0 754 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 CENPIQ92674 756 aaPredicted RBP13.27□□□□□ -0.29
VPS52-220ENST00000493674 ALG3Q92685 438 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 KRT35Q92764 455 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 SAMD11Q96NU1 681 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 PGLYRP2Q96PD5 576 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 DDX23Q9BUQ8 820 aaKnown RBP13.27□□□□□ -0.29
VPS52-220ENST00000493674 CARD9Q9H257 536 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 MRPL17Q9NRX2 175 aaKnown RBP13.27□□□□□ -0.29
VPS52-220ENST00000493674 SSX2IPQ9Y2D8 614 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 PCDHA3Q9Y5H8 950 aa13.27□□□□□ -0.29
VPS52-220ENST00000493674 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.26□□□□□ -0.29
VPS52-220ENST00000493674 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.26□□□□□ -0.29
VPS52-220ENST00000493674 GRXCR1A8MXD5 290 aa13.26□□□□□ -0.29
VPS52-220ENST00000493674 FSCN2O14926 492 aa13.26□□□□□ -0.29
VPS52-220ENST00000493674 SPOPO43791 374 aa13.26□□□□□ -0.29
VPS52-220ENST00000493674 LRCH4O75427 683 aa13.26□□□□□ -0.29
VPS52-220ENST00000493674 ZBED1O96006 694 aa13.26□□□□□ -0.29
VPS52-220ENST00000493674 MYOGP15173 224 aa13.26□□□□□ -0.29
VPS52-220ENST00000493674 ATF2P15336 505 aa13.26□□□□□ -0.29
VPS52-220ENST00000493674 ATF6P18850 670 aa13.26□□□□□ -0.29
VPS52-220ENST00000493674 PSMA2P25787 234 aa13.26□□□□□ -0.29
VPS52-220ENST00000493674 PCK1P35558 622 aa13.26□□□□□ -0.29
VPS52-220ENST00000493674 GRIK1P39086 918 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 185.7 ms