RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 TRAPPC11Q7Z392 1133 aa22.85■■□□□ 1.25
PFDN4-205ENST00000493356 DDX42Q86XP3 938 aaKnown RBP eCLIP22.85■■□□□ 1.25
PFDN4-205ENST00000493356 PHTF2Q8N3S3 785 aa22.85■■□□□ 1.25
PFDN4-205ENST00000493356 GLIS3Q8NEA6 775 aa22.85■■□□□ 1.25
PFDN4-205ENST00000493356 PANK2Q9BZ23 570 aa22.85■■□□□ 1.25
PFDN4-205ENST00000493356 SNX25Q9H3E2 840 aa22.85■■□□□ 1.25
PFDN4-205ENST00000493356 SLC32A1Q9H598 525 aa22.85■■□□□ 1.25
PFDN4-205ENST00000493356 ATXN2Q99700 1313 aaKnown RBP22.84■■□□□ 1.25
PFDN4-205ENST00000493356 ADAMTS9Q9P2N4 1935 aa22.84■■□□□ 1.25
PFDN4-205ENST00000493356 A0A087X0B3 334 aa22.84■■□□□ 1.25
PFDN4-205ENST00000493356 TCRBV21S2A2A0A5A6 115 aa22.84■■□□□ 1.25
PFDN4-205ENST00000493356 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.84■■□□□ 1.25
PFDN4-205ENST00000493356 TACC1O75410 805 aa22.84■■□□□ 1.25
PFDN4-205ENST00000493356 MBL2P11226 248 aaPredicted RBP22.84■■□□□ 1.25
PFDN4-205ENST00000493356 BYSLQ13895 437 aaKnown RBP22.84■■□□□ 1.25
PFDN4-205ENST00000493356 LY6G5CQ5SRR4 150 aa22.84■■□□□ 1.25
PFDN4-205ENST00000493356 PGBD3Q8N328 593 aa22.84■■□□□ 1.25
PFDN4-205ENST00000493356 ZNF518BQ9C0D4 1074 aa22.84■■□□□ 1.25
PFDN4-205ENST00000493356 ELOVL4Q9GZR5 314 aa22.84■■□□□ 1.25
PFDN4-205ENST00000493356 HSPBP1Q9NZL4 362 aa22.84■■□□□ 1.25
PFDN4-205ENST00000493356 TBC1D14Q9P2M4 693 aa22.84■■□□□ 1.25
PFDN4-205ENST00000493356 PILRBQ9UKJ0 227 aa22.84■■□□□ 1.25
PFDN4-205ENST00000493356 NEUROG3Q9Y4Z2 214 aa22.84■■□□□ 1.25
PFDN4-205ENST00000493356 E2F8A0AVK6 867 aa22.83■■□□□ 1.25
PFDN4-205ENST00000493356 SRRM3A6NNA2 597 aaPredicted RBP22.83■■□□□ 1.25
PFDN4-205ENST00000493356 HYAL3O43820 417 aaPredicted RBP22.83■■□□□ 1.25
PFDN4-205ENST00000493356 CST3P01034 146 aaPredicted RBP22.83■■□□□ 1.25
PFDN4-205ENST00000493356 PTPN1P18031 435 aaKnown RBP22.83■■□□□ 1.25
PFDN4-205ENST00000493356 ITPKAP23677 461 aa22.83■■□□□ 1.25
PFDN4-205ENST00000493356 DPP6P42658 865 aa22.83■■□□□ 1.25
PFDN4-205ENST00000493356 IFRD2Q12894 506 aaPredicted RBP22.83■■□□□ 1.25
PFDN4-205ENST00000493356 PEAR1Q5VY43 1037 aaPredicted RBP22.83■■□□□ 1.25
PFDN4-205ENST00000493356 PIP4P1Q86T03 277 aa22.83■■□□□ 1.25
PFDN4-205ENST00000493356 CCDC65Q8IXS2 484 aa22.83■■□□□ 1.25
PFDN4-205ENST00000493356 OR6B3Q8NGW1 331 aa22.83■■□□□ 1.25
PFDN4-205ENST00000493356 HPS3Q969F9 1004 aa22.83■■□□□ 1.25
PFDN4-205ENST00000493356 ZFRQ96KR1 1074 aaKnown RBP22.83■■□□□ 1.25
PFDN4-205ENST00000493356 DPEP3Q9H4B8 488 aa22.83■■□□□ 1.25
PFDN4-205ENST00000493356 HOXB3P14651 431 aaPredicted RBP22.82■■□□□ 1.24
PFDN4-205ENST00000493356 HOXD12P35452 270 aa22.82■■□□□ 1.24
PFDN4-205ENST00000493356 HOXD13P35453 343 aa22.82■■□□□ 1.24
PFDN4-205ENST00000493356 CEBPZQ03701 1054 aaKnown RBP22.82■■□□□ 1.24
PFDN4-205ENST00000493356 SEMA3BQ13214 749 aa22.82■■□□□ 1.24
PFDN4-205ENST00000493356 FAM173BQ6P4H8 233 aa22.82■■□□□ 1.24
PFDN4-205ENST00000493356 STXBP4Q6ZWJ1 553 aa22.82■■□□□ 1.24
PFDN4-205ENST00000493356 ETFBKMTQ8IXQ9 262 aa22.82■■□□□ 1.24
PFDN4-205ENST00000493356 ZCCHC14Q8WYQ9 949 aaKnown RBP22.82■■□□□ 1.24
PFDN4-205ENST00000493356 OTUB2Q96DC9 234 aa22.82■■□□□ 1.24
PFDN4-205ENST00000493356 KIAA1586Q9HCI6 787 aa22.82■■□□□ 1.24
PFDN4-205ENST00000493356 SPAARA0A1B0GVQ0 90 aa22.81■■□□□ 1.24
PFDN4-205ENST00000493356 UPK3BL1B0FP48 263 aa22.81■■□□□ 1.24
PFDN4-205ENST00000493356 UPK3BL2E5RIL1 263 aa22.81■■□□□ 1.24
PFDN4-205ENST00000493356 CLDN5O00501 218 aa22.81■■□□□ 1.24
PFDN4-205ENST00000493356 COCHO43405 550 aa22.81■■□□□ 1.24
PFDN4-205ENST00000493356 CFIP05156 583 aa22.81■■□□□ 1.24
PFDN4-205ENST00000493356 FAM163BP0C2L3 166 aa22.81■■□□□ 1.24
PFDN4-205ENST00000493356 DLATP10515 647 aaKnown RBP22.81■■□□□ 1.24
PFDN4-205ENST00000493356 YWHAQP27348 245 aa22.81■■□□□ 1.24
PFDN4-205ENST00000493356 GAD2Q05329 585 aa22.81■■□□□ 1.24
PFDN4-205ENST00000493356 COL9A2Q14055 689 aaPredicted RBP22.81■■□□□ 1.24
PFDN4-205ENST00000493356 NUP93Q8N1F7 819 aa22.81■■□□□ 1.24
PFDN4-205ENST00000493356 PDZD8Q8NEN9 1154 aa22.81■■□□□ 1.24
PFDN4-205ENST00000493356 B3GNT5Q9BYG0 378 aa22.81■■□□□ 1.24
PFDN4-205ENST00000493356 FSCN3Q9NQT6 498 aa22.81■■□□□ 1.24
PFDN4-205ENST00000493356 ANKRD11Q6UB99 2663 aaPredicted RBP22.81■■□□□ 1.24
PFDN4-205ENST00000493356 PCDH15Q96QU1 1955 aa22.8■■□□□ 1.24
PFDN4-205ENST00000493356 TBC1D3BA6NDS4 549 aa22.8■■□□□ 1.24
PFDN4-205ENST00000493356 HOXC11O43248 304 aaPredicted RBP22.8■■□□□ 1.24
PFDN4-205ENST00000493356 AP5Z1O43299 807 aa22.8■■□□□ 1.24
PFDN4-205ENST00000493356 TNNI1P19237 187 aa22.8■■□□□ 1.24
PFDN4-205ENST00000493356 TNNC1P63316 161 aa22.8■■□□□ 1.24
PFDN4-205ENST00000493356 SIM1P81133 766 aaPredicted RBP22.8■■□□□ 1.24
PFDN4-205ENST00000493356 SNRNP35Q16560 246 aaKnown RBP22.8■■□□□ 1.24
PFDN4-205ENST00000493356 WDR72Q3MJ13 1102 aa22.8■■□□□ 1.24
PFDN4-205ENST00000493356 ZNF513Q8N8E2 541 aaPredicted RBP22.8■■□□□ 1.24
PFDN4-205ENST00000493356 NAT16Q8N8M0 369 aa22.8■■□□□ 1.24
PFDN4-205ENST00000493356 B3GALNT2Q8NCR0 500 aa22.8■■□□□ 1.24
PFDN4-205ENST00000493356 KCNV2Q8TDN2 545 aa22.8■■□□□ 1.24
PFDN4-205ENST00000493356 OVCA2Q8WZ82 227 aa22.8■■□□□ 1.24
PFDN4-205ENST00000493356 FBXO32Q969P5 355 aa22.8■■□□□ 1.24
PFDN4-205ENST00000493356 KLK13Q9UKR3 277 aa22.8■■□□□ 1.24
PFDN4-205ENST00000493356 SLC6A14Q9UN76 642 aa22.8■■□□□ 1.24
PFDN4-205ENST00000493356 MSRB2Q9Y3D2 182 aa22.8■■□□□ 1.24
PFDN4-205ENST00000493356 A8MXQ7 604 aa22.79■■□□□ 1.24
PFDN4-205ENST00000493356 TULP3O75386 442 aa22.79■■□□□ 1.24
PFDN4-205ENST00000493356 RTN3O95197 1032 aaPredicted RBP22.79■■□□□ 1.24
PFDN4-205ENST00000493356 GABRG2P18507 467 aa22.79■■□□□ 1.24
PFDN4-205ENST00000493356 ATXN3P54252 364 aaPredicted RBP22.79■■□□□ 1.24
PFDN4-205ENST00000493356 RPL6Q02878 288 aaKnown RBP22.79■■□□□ 1.24
PFDN4-205ENST00000493356 DUOXA1Q1HG43 343 aa22.79■■□□□ 1.24
PFDN4-205ENST00000493356 BTBD8Q5XKL5 378 aa22.79■■□□□ 1.24
PFDN4-205ENST00000493356 TRMT11Q7Z4G4 463 aaKnown RBP22.79■■□□□ 1.24
PFDN4-205ENST00000493356 PDILTQ8N807 584 aa22.79■■□□□ 1.24
PFDN4-205ENST00000493356 RDH13Q8NBN7 331 aa22.79■■□□□ 1.24
PFDN4-205ENST00000493356 CEP76Q8TAP6 659 aa22.79■■□□□ 1.24
PFDN4-205ENST00000493356 CGRRF1Q99675 332 aa22.79■■□□□ 1.24
PFDN4-205ENST00000493356 GTPBP2Q9BX10 602 aaKnown RBP22.79■■□□□ 1.24
PFDN4-205ENST00000493356 DEC1Q9P2X7 70 aa22.79■■□□□ 1.24
PFDN4-205ENST00000493356 CHORDC1Q9UHD1 332 aaPredicted RBP22.79■■□□□ 1.24
PFDN4-205ENST00000493356 HCN2Q9UL51 889 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms