RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 MTCL1Q9Y4B5 1905 aaKnown RBP18.1■□□□□ 0.49
LIME1-208ENST00000493265 SSU72P8A0A1W2PR75 194 aa18.1■□□□□ 0.49
LIME1-208ENST00000493265 E5RJQ4 531 aa18.1■□□□□ 0.49
LIME1-208ENST00000493265 UNGP13051 313 aaPredicted RBP18.1■□□□□ 0.49
LIME1-208ENST00000493265 SMAD4Q13485 552 aaKnown RBP18.1■□□□□ 0.49
LIME1-208ENST00000493265 PTPN20Q4JDL3 420 aa18.1■□□□□ 0.49
LIME1-208ENST00000493265 CCDC122Q5T0U0 273 aa18.1■□□□□ 0.49
LIME1-208ENST00000493265 ACAD10Q6JQN1 1059 aa18.1■□□□□ 0.49
LIME1-208ENST00000493265 ANKRD54Q6NXT1 300 aa18.1■□□□□ 0.49
LIME1-208ENST00000493265 HFE2Q6ZVN8 426 aa18.1■□□□□ 0.49
LIME1-208ENST00000493265 DNAJB7Q7Z6W7 309 aaPredicted RBP18.1■□□□□ 0.49
LIME1-208ENST00000493265 ITIH5Q86UX2 942 aa18.1■□□□□ 0.49
LIME1-208ENST00000493265 LRRC8AQ8IWT6 810 aa18.1■□□□□ 0.49
LIME1-208ENST00000493265 HS6ST3Q8IZP7 471 aa18.1■□□□□ 0.49
LIME1-208ENST00000493265 IPO4Q8TEX9 1081 aaKnown RBP18.1■□□□□ 0.49
LIME1-208ENST00000493265 SMG7Q92540 1137 aaKnown RBP18.1■□□□□ 0.49
LIME1-208ENST00000493265 NDRG1Q92597 394 aaKnown RBP18.1■□□□□ 0.49
LIME1-208ENST00000493265 CORO1BQ9BR76 489 aa18.1■□□□□ 0.49
LIME1-208ENST00000493265 C11orf70Q9BRQ4 267 aa18.1■□□□□ 0.49
LIME1-208ENST00000493265 SFXN1Q9H9B4 322 aa18.1■□□□□ 0.49
LIME1-208ENST00000493265 HCFC1R1Q9NWW0 138 aa18.1■□□□□ 0.49
LIME1-208ENST00000493265 CD207Q9UJ71 328 aa18.1■□□□□ 0.49
LIME1-208ENST00000493265 ZNF318Q5VUA4 2279 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 TNFRSF10BO14763 440 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 XYLBO75191 536 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 GABBR2O75899 941 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 FTLP02792 175 aaPredicted RBP18.09■□□□□ 0.49
LIME1-208ENST00000493265 ERBB2P04626 1255 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 HNRNPA1P09651 372 aaKnown RBP eCLIP18.09■□□□□ 0.49
LIME1-208ENST00000493265 USP17L7P0C7H9 530 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 CSH1P0DML2 217 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 CSH2P0DML3 217 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 YWHAQP27348 245 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 CDH5P33151 784 aaPredicted RBP18.09■□□□□ 0.49
LIME1-208ENST00000493265 CYLC1P35663 651 aaPredicted RBP18.09■□□□□ 0.49
LIME1-208ENST00000493265 OR6B2Q6IFH4 312 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 ALKBH5Q6P6C2 394 aaKnown RBP18.09■□□□□ 0.49
LIME1-208ENST00000493265 TMEM139Q8IV31 216 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 SCUBE3Q8IX30 993 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 MSANTD4Q8NCY6 345 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 CLEC4CQ8WTT0 213 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 STK32AQ8WU08 396 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 KCTD13Q8WZ19 329 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 PSMG2Q969U7 264 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 HSFY1Q96LI6 401 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 ZNF830Q96NB3 372 aaPredicted RBP18.09■□□□□ 0.49
LIME1-208ENST00000493265 SLC4A5Q9BY07 1137 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 PRKD2Q9BZL6 878 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 ULBP1Q9BZM6 244 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 UBXN6Q9BZV1 441 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 ZDHHC7Q9NXF8 308 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 ADAM22Q9P0K1 906 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 CLEC1BQ9P126 229 aa18.09■□□□□ 0.49
LIME1-208ENST00000493265 WDFY4Q6ZS81 3184 aa18.08■□□□□ 0.49
LIME1-208ENST00000493265 TRIOO75962 3097 aa18.08■□□□□ 0.49
LIME1-208ENST00000493265 GOLGA8SH3BPF8 625 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 RTN2O75298 545 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 RTN3O95197 1032 aaPredicted RBP18.08■□□□□ 0.48
LIME1-208ENST00000493265 MYL4P12829 197 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 FECHP22830 423 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 ACADSBP45954 432 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 NTHL1P78549 312 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 NHLH1Q02575 133 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 CENPCQ03188 943 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 SLC18A3Q16572 532 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 ASTE1Q2TB18 679 aaPredicted RBP18.08■□□□□ 0.48
LIME1-208ENST00000493265 RAD9BQ6WBX8 426 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 TMEM184AQ6ZMB5 413 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 RTL10Q7L3V2 364 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 GRASPQ7Z6J2 395 aaPredicted RBP18.08■□□□□ 0.48
LIME1-208ENST00000493265 RNF135Q8IUD6 432 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 FBXO32Q969P5 355 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 ZNF707Q96C28 371 aaPredicted RBP18.08■□□□□ 0.48
LIME1-208ENST00000493265 PPP1R9BQ96SB3 815 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 ZNF334Q9HCZ1 680 aaPredicted RBP18.08■□□□□ 0.48
LIME1-208ENST00000493265 PNPLA8Q9NP80 782 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 CDH22Q9UJ99 828 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 NAGPAQ9UK23 515 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 ASB3Q9Y575 518 aa18.08■□□□□ 0.48
LIME1-208ENST00000493265 PATJQ8NI35 1801 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 NRDCO43847 1150 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 ZBED1O96006 694 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 ABL1P00519 1130 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 HMGA1P17096 107 aaKnown RBP18.07■□□□□ 0.48
LIME1-208ENST00000493265 PTPN2P17706 415 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 ABCB4P21439 1286 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 HOXA9P31269 272 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 SNX16P57768 344 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 TAF10Q12962 218 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 RAB41Q5JT25 222 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 SYCE2Q6PIF2 218 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 FAM183BPQ6ZVS7 135 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 CCDC170Q8IYT3 715 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 CCDC112Q8NEF3 446 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 C18orf8Q96DM3 657 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 FBXO44Q9H4M3 255 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 ASAH2Q9NR71 780 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 GMIPQ9P107 970 aa18.07■□□□□ 0.48
LIME1-208ENST00000493265 DNMT3BQ9UBC3 853 aaKnown RBP18.07■□□□□ 0.48
LIME1-208ENST00000493265 CHORDC1Q9UHD1 332 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms