RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 DNAJC9Q8WXX5 260 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 INPP5DQ92835 1189 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 APBB2Q92870 758 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 TUBGCP3Q96CW5 907 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 CLPBQ9H078 707 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 SYTL2Q9HCH5 934 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 EPHB3P54753 998 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 OTUD4Q01804 1114 aaKnown RBP16.85■□□□□ 0.29
BRAT1-206ENST00000493232 NFIAQ12857 509 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 TTI2Q6NXR4 508 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 ERAP2Q6P179 960 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 KRCC1Q9NPI7 259 aaPredicted RBP16.85■□□□□ 0.29
BRAT1-206ENST00000493232 PDGFCQ9NRA1 345 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 DDX28Q9NUL7 540 aaKnown RBP16.85■□□□□ 0.29
BRAT1-206ENST00000493232 NRXN1Q9ULB1 1477 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 INO80Q9ULG1 1556 aaPredicted RBP16.85■□□□□ 0.29
BRAT1-206ENST00000493232 DGKIO75912 1065 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 HOXC6P09630 235 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 GYS1P13807 737 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 ERFP50548 548 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 MTM1Q13496 603 aa16.85■□□□□ 0.29
BRAT1-206ENST00000493232 ASCC2Q9H1I8 757 aaPredicted RBP16.85■□□□□ 0.29
BRAT1-206ENST00000493232 LOC100653049A0A140TA62 436 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 KRT34O76011 436 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 ALBP02768 609 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 RHOCP08134 193 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 RBP1P09455 135 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 TGFB3P10600 412 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 THRAP10827 490 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 KCNA3P22001 575 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 PSMA4P25789 261 aaKnown RBP16.84■□□□□ 0.29
BRAT1-206ENST00000493232 CAMK2GQ13555 558 aaPredicted RBP16.84■□□□□ 0.29
BRAT1-206ENST00000493232 ITGA9Q13797 1035 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 PHKG1Q16816 387 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 LAYNQ6UX15 382 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 CASKIN2Q8WXE0 1202 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 ENTPD7Q9NQZ7 604 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 E9PCH4 1651 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 PTPN11Q06124 597 aaPredicted RBP16.84■□□□□ 0.29
BRAT1-206ENST00000493232 SPOCD1Q6ZMY3 1216 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 KRT78Q8N1N4 520 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 ACTRT1Q8TDG2 376 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 PDCD2LQ9BRP1 358 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 RRN3Q9NYV6 651 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 USP32Q8NFA0 1604 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 SLCO1B7G3V0H7 640 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 RARGP13631 454 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 IRAK1P51617 712 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 GALNT4Q8N4A0 578 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 CARNMT1Q8N4J0 409 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 THUMPD3Q9BV44 507 aaKnown RBP16.84■□□□□ 0.29
BRAT1-206ENST00000493232 ADGRE3Q9BY15 652 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 COPS7BQ9H9Q2 264 aaPredicted RBP16.84■□□□□ 0.29
BRAT1-206ENST00000493232 KANSL3Q9P2N6 904 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 TECPR2O15040 1411 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 VTNP04004 478 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 PLEKP08567 350 aaPredicted RBP16.84■□□□□ 0.29
BRAT1-206ENST00000493232 KDM7AQ6ZMT4 941 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 FAM83AQ86UY5 434 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 RIOX1Q9H6W3 641 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 GBA2Q9HCG7 927 aaPredicted RBP16.84■□□□□ 0.29
BRAT1-206ENST00000493232 TBC1D13Q9NVG8 400 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 USP18Q9UMW8 372 aa16.84■□□□□ 0.29
BRAT1-206ENST00000493232 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.84■□□□□ 0.29
BRAT1-206ENST00000493232 CLTCQ00610 1675 aaKnown RBP16.84■□□□□ 0.29
BRAT1-206ENST00000493232 KANSL1LA0AUZ9 987 aa16.83■□□□□ 0.29
BRAT1-206ENST00000493232 NUDT2P50583 147 aa16.83■□□□□ 0.29
BRAT1-206ENST00000493232 CSE1LP55060 971 aaKnown RBP16.83■□□□□ 0.29
BRAT1-206ENST00000493232 ERVK-24P63145 666 aa16.83■□□□□ 0.29
BRAT1-206ENST00000493232 OPTNQ96CV9 577 aa16.83■□□□□ 0.29
BRAT1-206ENST00000493232 EXOSC4Q9NPD3 245 aaKnown RBP16.83■□□□□ 0.29
BRAT1-206ENST00000493232 CISHQ9NSE2 258 aa16.83■□□□□ 0.29
BRAT1-206ENST00000493232 RUVBL2Q9Y230 463 aaKnown RBP16.83■□□□□ 0.29
BRAT1-206ENST00000493232 HPSEQ9Y251 543 aa16.83■□□□□ 0.29
BRAT1-206ENST00000493232 AGLP35573 1532 aa16.83■□□□□ 0.29
BRAT1-206ENST00000493232 SLC12A8A0AV02 714 aa16.83■□□□□ 0.29
BRAT1-206ENST00000493232 DEFA1P59665 94 aa16.83■□□□□ 0.29
BRAT1-206ENST00000493232 DEFA3P59666 94 aa16.83■□□□□ 0.29
BRAT1-206ENST00000493232 RHOAP61586 193 aa16.83■□□□□ 0.29
BRAT1-206ENST00000493232 DNAJC3Q13217 504 aa16.83■□□□□ 0.29
BRAT1-206ENST00000493232 C11orf96Q7Z7L8 435 aa16.83■□□□□ 0.29
BRAT1-206ENST00000493232 ITIH5Q86UX2 942 aa16.83■□□□□ 0.29
BRAT1-206ENST00000493232 SYTL5Q8TDW5 730 aaPredicted RBP16.83■□□□□ 0.29
BRAT1-206ENST00000493232 RAD54BQ9Y620 910 aa16.83■□□□□ 0.29
BRAT1-206ENST00000493232 EIF4E1BA6NMX2 242 aaKnown RBP16.83■□□□□ 0.28
BRAT1-206ENST00000493232 SNTNA6NMZ2 147 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 F8VZ95 297 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 M0R3G1 203 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 ZBTB39O15060 712 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 CLK1P49759 484 aaKnown RBP16.83■□□□□ 0.28
BRAT1-206ENST00000493232 NYAP1Q6ZVC0 841 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 GANQ9H2C0 597 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 VPS28Q9UK41 221 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 DYRK1BQ9Y463 629 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 COPG1Q9Y678 874 aaKnown RBP16.83■□□□□ 0.28
BRAT1-206ENST00000493232 CPS1P31327 1500 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 EPHX2P34913 555 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 CASP4P49662 377 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 EFEMP1Q12805 493 aa16.83■□□□□ 0.28
BRAT1-206ENST00000493232 ORC1Q13415 861 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms