RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 FAM193AP78312 1265 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 LMAN2Q12907 356 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 ALCAMQ13740 583 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 EOGTQ5NDL2 527 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 TDRD10Q5VZ19 366 aaKnown RBP14.58□□□□□ -0.08
SAMM50-204ENST00000493161 LYSMD4Q5XG99 296 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 PIP4P1Q86T03 277 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 MIB1Q86YT6 1006 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 PGBD3Q8N328 593 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 PDILTQ8N807 584 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 RDH13Q8NBN7 331 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 OR2I1PQ8NGU4 316 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 OR6B3Q8NGW1 331 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 SPACA7Q96KW9 195 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 KCNK16Q96T55 309 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 SNX25Q9H3E2 840 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 HSPBP1Q9NZL4 362 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 CHORDC1Q9UHD1 332 aaPredicted RBP14.58□□□□□ -0.08
SAMM50-204ENST00000493161 PILRBQ9UKJ0 227 aa14.58□□□□□ -0.08
SAMM50-204ENST00000493161 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.58□□□□□ -0.08
SAMM50-204ENST00000493161 ASCC3Q8N3C0 2202 aaKnown RBP14.58□□□□□ -0.08
SAMM50-204ENST00000493161 ADAMTS9Q9P2N4 1935 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 TACC1O75410 805 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 ADH1CP00326 375 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 CFIP05156 583 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 DLATP10515 647 aaKnown RBP14.57□□□□□ -0.08
SAMM50-204ENST00000493161 TXLNAP40222 546 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 WASP42768 502 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 TNFRSF4P43489 277 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 PPP3CCP48454 512 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 PGFP49763 221 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 SEMA3BQ13214 749 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 SLC23A3Q6PIS1 610 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 WDR49Q8IV35 697 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 ETFBKMTQ8IXQ9 262 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 KIAA1958Q8N8K9 716 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 SCAMP5Q8TAC9 235 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 ZCCHC14Q8WYQ9 949 aaKnown RBP14.57□□□□□ -0.08
SAMM50-204ENST00000493161 ZNF516Q92618 1163 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 ELMO3Q96BJ8 720 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 GZF1Q9H116 711 aaPredicted RBP14.57□□□□□ -0.08
SAMM50-204ENST00000493161 CCSER2Q9H7U1 834 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 FAM208BQ5VWN6 2430 aa14.57□□□□□ -0.08
SAMM50-204ENST00000493161 TBC1D3BA6NDS4 549 aa14.56□□□□□ -0.08
SAMM50-204ENST00000493161 TMEM8BA6NDV4 472 aa14.56□□□□□ -0.08
SAMM50-204ENST00000493161 TULP3O75386 442 aa14.56□□□□□ -0.08
SAMM50-204ENST00000493161 GABRG2P18507 467 aa14.56□□□□□ -0.08
SAMM50-204ENST00000493161 YWHAQP27348 245 aa14.56□□□□□ -0.08
SAMM50-204ENST00000493161 SIM1P81133 766 aaPredicted RBP14.56□□□□□ -0.08
SAMM50-204ENST00000493161 SURF1Q15526 300 aa14.56□□□□□ -0.08
SAMM50-204ENST00000493161 WDR72Q3MJ13 1102 aa14.56□□□□□ -0.08
SAMM50-204ENST00000493161 HSF5Q4G112 596 aaPredicted RBP14.56□□□□□ -0.08
SAMM50-204ENST00000493161 PEAR1Q5VY43 1037 aaPredicted RBP14.56□□□□□ -0.08
SAMM50-204ENST00000493161 CCDC73Q6ZRK6 1079 aa14.56□□□□□ -0.08
SAMM50-204ENST00000493161 TMEM25Q86YD3 366 aa14.56□□□□□ -0.08
SAMM50-204ENST00000493161 BBS7Q8IWZ6 715 aa14.56□□□□□ -0.08
SAMM50-204ENST00000493161 CCDC127Q96BQ5 260 aa14.56□□□□□ -0.08
SAMM50-204ENST00000493161 SLITRK1Q96PX8 696 aa14.56□□□□□ -0.08
SAMM50-204ENST00000493161 GTPBP2Q9BX10 602 aaKnown RBP14.56□□□□□ -0.08
SAMM50-204ENST00000493161 EHD2Q9NZN4 543 aa14.56□□□□□ -0.08
SAMM50-204ENST00000493161 TBC1D14Q9P2M4 693 aa14.56□□□□□ -0.08
SAMM50-204ENST00000493161 DMXL2Q8TDJ6 3036 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 ZFYVE26Q68DK2 2539 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 BAHCC1Q9P281 2608 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 PLXND1Q9Y4D7 1925 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 E2F8A0AVK6 867 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 A8MXQ7 604 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 KIAA0391O15091 583 aaKnown RBP14.55□□□□□ -0.08
SAMM50-204ENST00000493161 CLIC2O15247 247 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 TGFB1I1O43294 461 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 TNNI1P19237 187 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 CDH8P55286 799 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 MYL6P60660 151 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 RPL6Q02878 288 aaKnown RBP14.55□□□□□ -0.08
SAMM50-204ENST00000493161 GAD2Q05329 585 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 RING1Q06587 406 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 SNRNP35Q16560 246 aaKnown RBP14.55□□□□□ -0.08
SAMM50-204ENST00000493161 C10orf76Q5T2E6 689 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 PAQR9Q6ZVX9 377 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 DDX42Q86XP3 938 aaKnown RBP eCLIP14.55□□□□□ -0.08
SAMM50-204ENST00000493161 CCDC65Q8IXS2 484 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 NUP93Q8N1F7 819 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 ZNF513Q8N8E2 541 aaPredicted RBP14.55□□□□□ -0.08
SAMM50-204ENST00000493161 FBXO32Q969P5 355 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 USP28Q96RU2 1077 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 ACOX2Q99424 681 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 CGRRF1Q99675 332 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 TRIM9Q9C026 710 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 ELOVL4Q9GZR5 314 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 XYLT2Q9H1B5 865 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 SLC32A1Q9H598 525 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 CD93Q9NPY3 652 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 CALCOCO1Q9P1Z2 691 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 NXF1Q9UBU9 619 aaKnown RBP14.55□□□□□ -0.08
SAMM50-204ENST00000493161 SLC6A14Q9UN76 642 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 NEUROG3Q9Y4Z2 214 aa14.55□□□□□ -0.08
SAMM50-204ENST00000493161 A0A1W2PQF6 199 aa14.54□□□□□ -0.08
SAMM50-204ENST00000493161 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.54□□□□□ -0.08
SAMM50-204ENST00000493161 TAF4O00268 1085 aa14.54□□□□□ -0.08
SAMM50-204ENST00000493161 IRF1P10914 325 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms