RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 FAM193AP78312 1265 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 ATP11AP98196 1134 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 DSC1Q08554 894 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 ADCY1Q08828 1119 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 CALCOCO2Q13137 446 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 MTMR3Q13615 1198 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 KRT81Q14533 505 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 MTFR1Q15390 333 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 TAF5Q15542 800 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 PLEKHG4Q58EX7 1191 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 INTS6LQ5JSJ4 861 aaKnown RBP9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 KCNT1Q5JUK3 1230 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 CFAP58Q5T655 872 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 DRICH1Q6PGQ1 229 aaPredicted RBP9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 ZDHHC24Q6UX98 284 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 CD300LGQ6UXG3 332 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 PAQR9Q6ZVX9 377 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 BBS12Q6ZW61 710 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 ZNF365Q70YC5 407 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 RFX6Q8HWS3 928 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 THEM5Q8N1Q8 247 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 TTC13Q8NBP0 860 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 KCTD6Q8NC69 237 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 CMASQ8NFW8 434 aaPredicted RBP9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 HASPINQ8TF76 798 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 APBB2Q92870 758 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 KHSRPQ92945 711 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 PCED1BQ96HM7 432 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 FAM193BQ96PV7 902 aaPredicted RBP9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 TBCBQ99426 244 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 RTP3Q9BQQ7 232 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 ACBD6Q9BR61 282 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 RNF208Q9H0X6 261 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 ELAC1Q9H777 363 aaKnown RBP9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 ZDHHC18Q9NUE0 388 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 TMEM161AQ9NX61 479 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 GRHL1Q9NZI5 618 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 WHRNQ9P202 907 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 KANSL3Q9P2N6 904 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 PCDHB8Q9UN66 801 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 PLXNA3P51805 1871 aa9.57□□□□□ -0.88
SMARCC1-208ENST00000492896 LTBP2Q14767 1821 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 COL4A4P53420 1690 aaPredicted RBP9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 MDM4O15151 490 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 OPA1O60313 960 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 PQBP1O60828 265 aaKnown RBP9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 BEST1O76090 585 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 SULT1E1P49888 294 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 ARSEP51690 589 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 PLTPP55058 493 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 VCPP55072 806 aaKnown RBP9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 HDAC4P56524 1084 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 MAP3K7CLP57077 242 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 DYNLT1P63172 113 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 MRPS5P82675 430 aaKnown RBP9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 TSPY1Q01534 308 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 RNASELQ05823 741 aaKnown RBP9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 ADCY2Q08462 1091 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 BYSLQ13895 437 aaKnown RBP9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 PDK2Q15119 407 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 MAPRE1Q15691 268 aaKnown RBP9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 KCTD19Q17RG1 926 aaPredicted RBP9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 BOLA3Q53S33 107 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 SPDYCQ5MJ68 293 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 SH3PXD2AQ5TCZ1 1133 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 OVOS1Q6IE37 1185 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 SCYL2Q6P3W7 929 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 CYP4V2Q6ZWL3 525 aaPredicted RBP9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 STRADAQ7RTN6 431 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 TMC3Q7Z5M5 1100 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 VSIG1Q86XK7 387 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 MAP7D3Q8IWC1 876 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 ABI1Q8IZP0 508 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 GOLGA6L1Q8N7Z2 621 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 BBOF1Q8ND07 529 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 CCHCR1Q8TD31 782 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 FAM149B1Q96BN6 582 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 HAUS1Q96CS2 278 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 SNF8Q96H20 258 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 SMOQ99835 787 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 FAM118BQ9BPY3 351 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 DDX23Q9BUQ8 820 aaKnown RBP9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 SNRNP25Q9BV90 132 aaKnown RBP9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 CALN1Q9BXU9 219 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 TBC1D13Q9NVG8 400 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 DNPEPQ9ULA0 475 aa9.56□□□□□ -0.88
SMARCC1-208ENST00000492896 AGPSO00116 658 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 HOXA2O43364 376 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 B4GALT3O60512 393 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 CST8O60676 142 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 PPFIA2O75334 1257 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 DDHD2O94830 711 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 ENDOD1O94919 500 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 PARNO95453 639 aaKnown RBP9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 KRT14P02533 472 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 ITGB1P05556 798 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 CD48P09326 243 aa9.55□□□□□ -0.88
SMARCC1-208ENST00000492896 HSD17B3P37058 310 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms