RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 POLR2BP30876 1174 aaKnown RBP14.01□□□□□ -0.17
HDAC3-213ENST00000492506 PNPLA4P41247 253 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 SLC6A11P48066 632 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 GSDMDP57764 484 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 SIM1P81133 766 aaPredicted RBP14.01□□□□□ -0.17
HDAC3-213ENST00000492506 TTC31Q49AM3 519 aaPredicted RBP14.01□□□□□ -0.17
HDAC3-213ENST00000492506 RILPL1Q5EBL4 403 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 SWT1Q5T5J6 900 aaKnown RBP14.01□□□□□ -0.17
HDAC3-213ENST00000492506 ARL6IP4Q66PJ3 421 aaKnown RBP14.01□□□□□ -0.17
HDAC3-213ENST00000492506 FAM171BQ6P995 826 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 FBXO38Q6PIJ6 1188 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 ARMCX6Q7L4S7 300 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 LPCAT2Q7L5N7 544 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 ADGRG2Q8IZP9 1017 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 ALLCQ8N6M5 410 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 C1orf127Q8N9H9 656 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 ZSWIM2Q8NEG5 633 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 C16orf45Q96MC5 204 aaPredicted RBP14.01□□□□□ -0.17
HDAC3-213ENST00000492506 NUSAP1Q9BXS6 441 aaKnown RBP14.01□□□□□ -0.17
HDAC3-213ENST00000492506 SLC32A1Q9H598 525 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 GDAP2Q9NXN4 497 aa14.01□□□□□ -0.17
HDAC3-213ENST00000492506 LEFTY2O00292 366 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 SLC26A4O43511 780 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 ADAM23O75077 832 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 IL18RAPO95256 599 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 ITGB3P05106 788 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 ABCD1P33897 745 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 KIR2DL1P43626 348 aaPredicted RBP14□□□□□ -0.17
HDAC3-213ENST00000492506 ZNF75DP51815 510 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 MCM6Q14566 821 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 KCNB1Q14721 858 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 SPDYCQ5MJ68 293 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 EMC10Q5UCC4 262 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 SARM1Q6SZW1 724 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 NYAP1Q6ZVC0 841 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 TTC30AQ86WT1 665 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 TMEM86AQ8N2M4 240 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 FSIP1Q8NA03 581 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 TXNDC5Q8NBS9 432 aaKnown RBP14□□□□□ -0.17
HDAC3-213ENST00000492506 WHAMMQ8TF30 809 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 FUBP3Q96I24 572 aaKnown RBP eCLIP14□□□□□ -0.17
HDAC3-213ENST00000492506 FAM84AQ96KN4 292 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 ZSCAN31Q96LW9 406 aaPredicted RBP14□□□□□ -0.17
HDAC3-213ENST00000492506 STRA6Q9BX79 667 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 RNF38Q9H0F5 515 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 L2HGDHQ9H9P8 463 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 FSCN3Q9NQT6 498 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 AGAP1Q9UPQ3 857 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 CEP83Q9Y592 693 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 BPTFQ12830 3046 aa14□□□□□ -0.17
HDAC3-213ENST00000492506 ATXN2Q99700 1313 aaKnown RBP13.99□□□□□ -0.17
HDAC3-213ENST00000492506 HUS1O60921 280 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 ATP2C2O75185 946 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 PPP1R37O75864 691 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 ALDH1A2O94788 518 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 KLF8O95600 359 aaPredicted RBP13.99□□□□□ -0.17
HDAC3-213ENST00000492506 OLFM2O95897 454 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 CCDC172P0C7W6 258 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 ZSCAN22P10073 491 aaPredicted RBP13.99□□□□□ -0.17
HDAC3-213ENST00000492506 PFKLP17858 780 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 ITPKAP23677 461 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 TIE1P35590 1138 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 USP8P40818 1118 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 MAGEA11P43364 429 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 USP46P62068 366 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 TFAMQ00059 246 aaKnown RBP13.99□□□□□ -0.17
HDAC3-213ENST00000492506 MYL7Q01449 175 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 DHCR24Q15392 516 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 ZSCAN26Q16670 478 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 HSF5Q4G112 596 aaPredicted RBP13.99□□□□□ -0.17
HDAC3-213ENST00000492506 ZNF720Q7Z2F6 126 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 LIMS2Q7Z4I7 341 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 SRLQ86TD4 932 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 C12orf40Q86WS4 652 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 PROSER1Q86XN7 944 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 SPATA2LQ8IUW3 424 aaPredicted RBP13.99□□□□□ -0.17
HDAC3-213ENST00000492506 SCN4BQ8IWT1 228 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 DRC7Q8IY82 874 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 LRRC52Q8N7C0 313 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 KIAA1958Q8N8K9 716 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 SPATA18Q8TC71 538 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 RAD54LQ92698 747 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 SPATA17Q96L03 361 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 AK8Q96MA6 479 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 ZHX3Q9H4I2 956 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 CAPN10Q9HC96 672 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 ZDHHC4Q9NPG8 344 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 ACACAQ13085 2346 aa13.99□□□□□ -0.17
HDAC3-213ENST00000492506 MAP3K13O43283 966 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 KAT7O95251 611 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 PNMA6AP0CW24 399 aaPredicted RBP13.98□□□□□ -0.17
HDAC3-213ENST00000492506 PLCG1P19174 1290 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 HOXD12P35452 270 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 EIF2DP41214 584 aaKnown RBP13.98□□□□□ -0.17
HDAC3-213ENST00000492506 SLC7A9P82251 487 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 KCNA1Q09470 495 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 SOWAHAQ2M3V2 549 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 LYSMD4Q5XG99 296 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 RHBDF2Q6PJF5 856 aa13.98□□□□□ -0.17
HDAC3-213ENST00000492506 LEKR1Q6ZMV7 388 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms