RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 VGLL4Q14135 290 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 SYCP2LQ5T4T6 812 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 UBA3Q8TBC4 463 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 CNKSR2Q8WXI2 1034 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 CNPY3Q9BT09 278 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 USP29Q9HBJ7 922 aa16.82■□□□□ 0.28
SEMA4D-220ENST00000492386 C2CD4BA6NLJ0 364 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 CHADO15335 359 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 C1QAP02745 245 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 STAG3L1P0CL83 205 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 CYP3A5P20815 502 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 CALB2P22676 271 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 NAA25Q14CX7 972 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 MAP1SQ66K74 1059 aaPredicted RBP16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 EFCAB12Q6NXP0 572 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 PIWIL1Q96J94 861 aaKnown RBP16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 TSSK1BQ9BXA7 367 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 VRTNQ9H8Y1 702 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 CYP3A43Q9HB55 503 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 MCM3APO60318 1980 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 VDRP11473 427 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 YWHAGP61981 247 aaKnown RBP eCLIP16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 C15orf59Q2T9L4 293 aaPredicted RBP16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 FAM47CQ5HY64 1035 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 KCNV2Q8TDN2 545 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 STK32AQ8WU08 396 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 RXFP2Q8WXD0 754 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 HEXIM2Q96MH2 286 aaKnown RBP16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 SPATA33Q96N06 139 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 MIPEPQ99797 713 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 TRIM55Q9BYV6 548 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 KCNK13Q9HB14 408 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 CNTN3Q9P232 1028 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 PPP2R3BQ9Y5P8 575 aa16.81■□□□□ 0.28
SEMA4D-220ENST00000492386 LTBP3Q9NS15 1303 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 A0A0G2JND7 137 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 PIK3R2O00459 728 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 SPAG6O75602 509 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 PGK2P07205 417 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 INHBAP08476 426 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 PYGBP11216 843 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 ATICP31939 592 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 TFDP2Q14188 446 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 PRKD1Q15139 912 aaPredicted RBP16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 WASHC2DQ5SRD0 308 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 C1orf228Q6PIY5 440 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 BZW1Q7L1Q6 419 aaKnown RBP16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 PRPF39Q86UA1 669 aaKnown RBP16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 FAF2Q96CS3 445 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 RNF157Q96PX1 679 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 FAM111AQ96PZ2 611 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 IFT122Q9HBG6 1241 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 PNPLA8Q9NP80 782 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 IKBKGQ9Y6K9 419 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 ZSWIM8A7E2V4 1837 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 PAPPA2Q9BXP8 1791 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 H7C0C1 242 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 HNRNPCL1O60812 293 aaKnown RBP16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 TPBGLP0DKB5 382 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 PDGFRAP16234 1089 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 IL4RP24394 825 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 ATP5OP48047 213 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 YWHAZP63104 245 aaKnown RBP16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 WDR78Q5VTH9 848 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 FAM183BPQ6ZVS7 135 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 DPH6Q7L8W6 267 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 ENDOVQ8N8Q3 282 aaKnown RBP16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 DENND2DQ9H6A0 471 aaPredicted RBP16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 HEY2Q9UBP5 337 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 TTLL3Q9Y4R7 772 aa16.8■□□□□ 0.28
SEMA4D-220ENST00000492386 E5RJQ4 531 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 CSDE1O75534 798 aaKnown RBP16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 TGDSO95455 350 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 BGNP21810 368 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 DEFB132Q7Z7B7 95 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 PLD5Q8N7P1 536 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 COPS5Q92905 334 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 SKA1Q96BD8 255 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 RTP4Q96DX8 246 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 PTCD3Q96EY7 689 aaKnown RBP16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 HPDLQ96IR7 371 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 NUDCD1Q96RS6 583 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 NFKBIZQ9BYH8 718 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 BATF3Q9NR55 127 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 RAB6BQ9NRW1 208 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 ARL8BQ9NVJ2 186 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 PRMT7Q9NVM4 692 aaPredicted RBP16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 RPL26L1Q9UNX3 145 aaKnown RBP16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 SRCAPQ6ZRS2 3230 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 OTOFQ9HC10 1997 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 PRPSAP2O60256 369 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 DNAJC6O75061 913 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 CNMDO75829 334 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 FAM155BO75949 473 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 PFKMP08237 780 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 DLDP09622 509 aaKnown RBP16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 MCF2P10911 925 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 INCA1Q0VD86 236 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 AMHR2Q16671 573 aa16.79■□□□□ 0.28
SEMA4D-220ENST00000492386 CDO1Q16878 200 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms