RNA–Protein interactions for RNA: ENST00000491729.1

LSS-210, Transcript of lanosterol synthase, humanhuman

TSL 2

Gene LSS, Length 2,143 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-210ENST00000491729 ARHGEF18Q6ZSZ5 1173 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 POLNQ7Z5Q5 900 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 ECHDC2Q86YB7 292 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 GBP7Q8N8V2 638 aaPredicted RBP13.78□□□□□ -0.2
LSS-210ENST00000491729 FAXDC2Q96IV6 333 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 PPP1R10Q96QC0 940 aaKnown RBP13.78□□□□□ -0.2
LSS-210ENST00000491729 PLEKHA5Q9HAU0 1116 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 RGS18Q9NS28 235 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 AGAP1Q9UPQ3 857 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 C2CD2Q9Y426 696 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 NME7Q9Y5B8 376 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 SQORQ9Y6N5 450 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 F8W810 466 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 ENPP3O14638 875 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 DNALI1O14645 258 aaPredicted RBP13.78□□□□□ -0.2
LSS-210ENST00000491729 RASSF9O75901 435 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 CFHP08603 1231 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 FGFR1P11362 822 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 KCNE1P15382 129 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 GJC1P36383 396 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 GATMP50440 423 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 TRIP13Q15645 432 aaPredicted RBP13.78□□□□□ -0.2
LSS-210ENST00000491729 KYNUQ16719 465 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 TFDP3Q5H9I0 405 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 DCUN1D2Q6PH85 259 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 PPP1R21Q6ZMI0 780 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 PHLDB2Q86SQ0 1253 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 CRIPAKQ8N1N5 446 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 FRMD8P1Q9BZ68 369 aaPredicted RBP13.78□□□□□ -0.2
LSS-210ENST00000491729 PHACTR1Q9C0D0 580 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 HCSTQ9UBK5 93 aa13.78□□□□□ -0.2
LSS-210ENST00000491729 DRG1Q9Y295 367 aaKnown RBP13.78□□□□□ -0.2
LSS-210ENST00000491729 TCRBV5S1A1TA0A578 114 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 RPLP2P05387 115 aaKnown RBP13.77□□□□□ -0.21
LSS-210ENST00000491729 ASPAP45381 313 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 SCNN1GP51170 649 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 FAM189BP81408 668 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 XRCC4Q13426 336 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 TRPC3Q13507 836 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 BFSP2Q13515 415 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 MORF4L2Q15014 288 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 P3H1Q32P28 736 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 CCDC38Q502W7 563 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 CLLU1OSQ5K130 101 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 ZFYVE27Q5T4F4 411 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 SCARA5Q6ZMJ2 495 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 TMCO2Q7Z6W1 182 aaPredicted RBP13.77□□□□□ -0.21
LSS-210ENST00000491729 ANKLE1Q8NAG6 615 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 ANKRD36BP1Q96IX9 119 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 TMEM106CQ9BVX2 250 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 SLC40A1Q9NP59 571 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 UBN1Q9NPG3 1134 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 NXF1Q9UBU9 619 aaKnown RBP13.77□□□□□ -0.21
LSS-210ENST00000491729 EFR3BQ9Y2G0 817 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 RALGAPA2Q2PPJ7 1873 aa13.77□□□□□ -0.21
LSS-210ENST00000491729 O00370 1275 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 MED7O43513 233 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 HCRTO43612 131 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 POMCP01189 267 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 TNNC2P02585 160 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 SSTR3P32745 418 aaPredicted RBP13.76□□□□□ -0.21
LSS-210ENST00000491729 IFNAR2P48551 515 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 VPS41P49754 854 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 YARSP54577 528 aaKnown RBP13.76□□□□□ -0.21
LSS-210ENST00000491729 PPARDQ03181 441 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 ORC1Q13415 861 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 KYAT1Q16773 422 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 ZNF699Q32M78 642 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 WDR72Q3MJ13 1102 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 SWT1Q5T5J6 900 aaKnown RBP13.76□□□□□ -0.21
LSS-210ENST00000491729 VSTM1Q6UX27 236 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 SPOCD1Q6ZMY3 1216 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 ALLCQ8N6M5 410 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 C3orf58Q8NDZ4 430 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 SGSM3Q96HU1 749 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 MCEEQ96PE7 176 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 RBM15Q96T37 977 aaKnown RBP eCLIP13.76□□□□□ -0.21
LSS-210ENST00000491729 TSPYL2Q9H2G4 693 aaPredicted RBP13.76□□□□□ -0.21
LSS-210ENST00000491729 SMYD3Q9H7B4 428 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 CISHQ9NSE2 258 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 KLC4Q9NSK0 619 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 TMEM39AQ9NV64 488 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 NKIRAS1Q9NYS0 192 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 SENP1Q9P0U3 644 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 HMGXB4Q9UGU5 601 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 SHOC2Q9UQ13 582 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 CEP290O15078 2479 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 TTC3P53804 2025 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 ALPK3Q96L96 1907 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 CDH23Q9H251 3354 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 SNX3O60493 162 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 SUN1O94901 812 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 OAS1P00973 400 aaKnown RBP13.76□□□□□ -0.21
LSS-210ENST00000491729 ITGAVP06756 1048 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 BRAFP15056 766 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 PPP1R15BQ5SWA1 713 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 DAB2IPQ5VWQ8 1189 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 C9orf57Q5W0N0 161 aa13.76□□□□□ -0.21
LSS-210ENST00000491729 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.76□□□□□ -0.211e-17■□□□□ 9.8
LSS-210ENST00000491729 TRPM8Q7Z2W7 1104 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms