RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 DPH6Q7L8W6 267 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 PROSER1Q86XN7 944 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 MYCBPAPQ8TBZ2 947 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 HPDLQ96IR7 371 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 SPACA7Q96KW9 195 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 CAMK1GQ96NX5 476 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 MRPL45Q9BRJ2 306 aaKnown RBP14.11□□□□□ -0.15
USF1-206ENST00000491629 POLMQ9NP87 494 aaPredicted RBP14.11□□□□□ -0.15
USF1-206ENST00000491629 CD93Q9NPY3 652 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 BCCIPQ9P287 314 aaKnown RBP eCLIP14.11□□□□□ -0.15
USF1-206ENST00000491629 SLC6A14Q9UN76 642 aa14.11□□□□□ -0.15
USF1-206ENST00000491629 URB1O60287 2271 aaKnown RBP14.11□□□□□ -0.15
USF1-206ENST00000491629 TP53BP1Q12888 1972 aaPredicted RBP14.11□□□□□ -0.15
USF1-206ENST00000491629 A0A1W2PQF6 199 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 FRMD3A2A2Y4 597 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 LDHAP00338 332 aaKnown RBP14.1□□□□□ -0.15
USF1-206ENST00000491629 SERPINF2P08697 491 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 ADH5P11766 374 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 PDE6CP51160 858 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 DUOXA1Q1HG43 343 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 MDH1BQ5I0G3 518 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 EOGTQ5NDL2 527 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 MINDY1Q8N5J2 469 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 NAT16Q8N8M0 369 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 GLIS3Q8NEA6 775 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 RASSF8Q8NHQ8 419 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 TMX3Q96JJ7 454 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 C8orf48Q96LL4 319 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 CEP295NLQ96MC4 621 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 GTPBP2Q9BX10 602 aaKnown RBP14.1□□□□□ -0.15
USF1-206ENST00000491629 DPEP3Q9H4B8 488 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 SEL1LQ9UBV2 794 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 GPSM3Q9Y4H4 160 aa14.1□□□□□ -0.15
USF1-206ENST00000491629 CKAP5Q14008 2032 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 IGHV1OR15-9A0A0B4J2B8 117 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 H3BQV1 296 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 PRPF6O94906 941 aaKnown RBP14.09□□□□□ -0.15
USF1-206ENST00000491629 GCNT3O95395 438 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 CST3P01034 146 aaPredicted RBP14.09□□□□□ -0.15
USF1-206ENST00000491629 TMEM191BP0C7N4 346 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 HOXD12P35452 270 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 HOXD13P35453 343 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 WASP42768 502 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 RPL6Q02878 288 aaKnown RBP14.09□□□□□ -0.15
USF1-206ENST00000491629 ZNF33AQ06730 810 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 SOWAHCQ53LP3 525 aaPredicted RBP14.09□□□□□ -0.15
USF1-206ENST00000491629 CBWD2Q8IUF1 395 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 PGBD3Q8N328 593 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 NOC3LQ8WTT2 800 aaKnown RBP14.09□□□□□ -0.15
USF1-206ENST00000491629 ERLEC1Q96DZ1 483 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 CLIC6Q96NY7 704 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 ACOX2Q99424 681 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 ZNF518BQ9C0D4 1074 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 OLFML3Q9NRN5 406 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 CALCOCO1Q9P1Z2 691 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 EXOC7Q9UPT5 735 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 SHROOM3Q8TF72 1996 aa14.09□□□□□ -0.15
USF1-206ENST00000491629 FLNBO75369 2602 aaKnown RBP14.09□□□□□ -0.15
USF1-206ENST00000491629 A0A087X0B3 334 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 CLDN5O00501 218 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 ARHGAP33O14559 1287 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 SLC9A3R1O14745 358 aaPredicted RBP14.08□□□□□ -0.16
USF1-206ENST00000491629 TRIM66O15016 1216 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 AP5Z1O43299 807 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 COCHO43405 550 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 OPHN1O60890 802 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 TULP3O75386 442 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 ADH1CP00326 375 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 ABL1P00519 1130 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 MBL2P11226 248 aaPredicted RBP14.08□□□□□ -0.16
USF1-206ENST00000491629 GAP43P17677 238 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 PPP3CCP48454 512 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 PGFP49763 221 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 GFPT1Q06210 699 aaPredicted RBP14.08□□□□□ -0.16
USF1-206ENST00000491629 SCAPQ12770 1279 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 MYO1EQ12965 1108 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 C19orf48Q6RUI8 117 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 TMEM25Q86YD3 366 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 BBS7Q8IWZ6 715 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 GPD1LQ8N335 351 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 ZNF513Q8N8E2 541 aaPredicted RBP14.08□□□□□ -0.16
USF1-206ENST00000491629 ANKRD36BP1Q96IX9 119 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 B3GNT5Q9BYG0 378 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 TRIM9Q9C026 710 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 GZF1Q9H116 711 aaPredicted RBP14.08□□□□□ -0.16
USF1-206ENST00000491629 SLC6A17Q9H1V8 727 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 DNAAF2Q9NVR5 837 aaKnown RBP14.08□□□□□ -0.16
USF1-206ENST00000491629 STK17AQ9UEE5 414 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 FBXO2Q9UK22 296 aaPredicted RBP14.08□□□□□ -0.16
USF1-206ENST00000491629 KIF3AQ9Y496 699 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 CLIC4Q9Y696 253 aa14.08□□□□□ -0.16
USF1-206ENST00000491629 E2F8A0AVK6 867 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 TBC1D3BA6NDS4 549 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 H0Y626 953 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 HOXC11O43248 304 aaPredicted RBP14.07□□□□□ -0.16
USF1-206ENST00000491629 SH3BP5O60239 455 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 GREM1O60565 184 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 TRIM16O95361 564 aa14.07□□□□□ -0.16
USF1-206ENST00000491629 PTPN1P18031 435 aaKnown RBP14.07□□□□□ -0.16
USF1-206ENST00000491629 NDUFV2P19404 249 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms