RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 COCHO43405 550 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 AKAP3O75969 853 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 APBB3O95704 486 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 RPN1P04843 607 aaKnown RBP16.67■□□□□ 0.26
SMPD4-220ENST00000491319 KRT85P78386 507 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 MESP2Q0VG99 397 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 DHCR24Q15392 516 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 C2orf27AQ580R0 203 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 C1orf220Q5T0J3 134 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 SPOPLQ6IQ16 392 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 C12orf40Q86WS4 652 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 SFTPA1Q8IWL2 248 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 PDZD8Q8NEN9 1154 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 TMC2Q8TDI7 906 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 USP33Q8TEY7 942 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 OVCA2Q8WZ82 227 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 LOXL4Q96JB6 756 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 ZFRQ96KR1 1074 aaKnown RBP16.67■□□□□ 0.26
SMPD4-220ENST00000491319 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.67■□□□□ 0.26
SMPD4-220ENST00000491319 USP25Q9UHP3 1055 aa16.67■□□□□ 0.26
SMPD4-220ENST00000491319 TPRP12270 2363 aaKnown RBP16.67■□□□□ 0.26
SMPD4-220ENST00000491319 SLC9A3R1O14745 358 aaPredicted RBP16.66■□□□□ 0.26
SMPD4-220ENST00000491319 DCLK1O15075 740 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 AP1G2O75843 785 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 BEST1O76090 585 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 MYL1P05976 194 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 PIK3CAP42336 1068 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 SYKP43405 635 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 ASPAP45381 313 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 NDST1P52848 882 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 SGSM1Q2NKQ1 1148 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 PLK5Q496M5 336 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 AASDHQ4L235 1098 aaPredicted RBP16.66■□□□□ 0.26
SMPD4-220ENST00000491319 SV2AQ7L0J3 742 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 DDX42Q86XP3 938 aaKnown RBP eCLIP16.66■□□□□ 0.26
SMPD4-220ENST00000491319 ADGRG2Q8IZP9 1017 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 KIAA1958Q8N8K9 716 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 ZMIZ2Q8NF64 920 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 ZC3H10Q96K80 434 aaKnown RBP16.66■□□□□ 0.26
SMPD4-220ENST00000491319 SMOQ99835 787 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 SMOC1Q9H4F8 434 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 CCSER2Q9H7U1 834 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 RXFP3Q9NSD7 469 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 FAM49BQ9NUQ9 324 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 GMIPQ9P107 970 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 EBF1Q9UH73 591 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 CHORDC1Q9UHD1 332 aaPredicted RBP16.66■□□□□ 0.26
SMPD4-220ENST00000491319 PI4KAP42356 2102 aa16.66■□□□□ 0.26
SMPD4-220ENST00000491319 ASS1P00966 412 aaKnown RBP16.65■□□□□ 0.26
SMPD4-220ENST00000491319 HLA-DRAP01903 254 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 P4HA1P13674 534 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 MPLP40238 635 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 SLC6A11P48066 632 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 NDUFA8P51970 172 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 DGKEP52429 567 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 HECTD3Q5T447 861 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 RHBDF2Q6PJF5 856 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 CCDC33Q8N5R6 958 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 C12orf29Q8N999 325 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 TSTD1Q8NFU3 115 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 SLC2A14Q8TDB8 520 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 TPSD1Q9BZJ3 242 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 DUSP15Q9H1R2 295 aaPredicted RBP16.65■□□□□ 0.26
SMPD4-220ENST00000491319 IL37Q9NZH6 218 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 TRAF3IP3Q9Y228 551 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 FRMD4BQ9Y2L6 1034 aa16.65■□□□□ 0.26
SMPD4-220ENST00000491319 FAM237AA0A1B0GTK4 181 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 FAM92AA1XBS5 289 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 CALUO43852 315 aaPredicted RBP16.64■□□□□ 0.25
SMPD4-220ENST00000491319 FOXD2O60548 495 aaPredicted RBP16.64■□□□□ 0.25
SMPD4-220ENST00000491319 RHOBTB3O94955 611 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 ADH1CP00326 375 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 ZDHHC11BP0C7U3 371 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 ZNF806P0C7X5 589 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 TRIM49P0CI25 452 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 TRIM49CP0CI26 452 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 CHRM1P11229 460 aaPredicted RBP16.64■□□□□ 0.25
SMPD4-220ENST00000491319 ADH5P11766 374 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 NR2F2P24468 414 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 PGFP49763 221 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 TUBP50607 506 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 VAMP7P51809 220 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 MAP3K7CLP57077 242 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 KDSRQ06136 332 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 PPM1JQ5JR12 505 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 PLA2G2CQ5R387 149 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 LY6G5CQ5SRR4 150 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 SNX30Q5VWJ9 437 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 ANO7Q6IWH7 933 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 C12orf50Q8NA57 414 aaPredicted RBP16.64■□□□□ 0.25
SMPD4-220ENST00000491319 CCDC26Q8TAB7 109 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 TAF4BQ92750 862 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 WBP2Q969T9 261 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 TWNKQ96RR1 684 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 PNKPQ96T60 521 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 MMP17Q9ULZ9 603 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 MAPK8IP1Q9UQF2 711 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 INVSQ9Y283 1065 aa16.64■□□□□ 0.25
SMPD4-220ENST00000491319 E2F8A0AVK6 867 aa16.63■□□□□ 0.25
SMPD4-220ENST00000491319 IKBKBO14920 756 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms