RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 HOXA6P31267 233 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 PGFP49763 221 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 PMS1P54277 932 aaKnown RBP19.07■□□□□ 0.64
HMGN1-219ENST00000491183 NR1H3Q13133 447 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 SRSF5Q13243 272 aaKnown RBP19.07■□□□□ 0.64
HMGN1-219ENST00000491183 KRT39Q6A163 491 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 ANKRD40Q6AI12 368 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 FILIP1Q7Z7B0 1213 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 LONP2Q86WA8 852 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 ADGRG2Q8IZP9 1017 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 KIAA1958Q8N8K9 716 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 CD101Q93033 1021 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 TIGD1Q96MW7 591 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 HNRNPABQ99729 332 aaKnown RBP19.07■□□□□ 0.64
HMGN1-219ENST00000491183 IMPG2Q9BZV3 1241 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 NIF3L1Q9GZT8 377 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 POLR3BQ9NW08 1133 aaPredicted RBP19.07■□□□□ 0.64
HMGN1-219ENST00000491183 GMIPQ9P107 970 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 NCDNQ9UBB6 729 aa19.07■□□□□ 0.64
HMGN1-219ENST00000491183 WDR87Q6ZQQ6 2873 aa19.06■□□□□ 0.64
HMGN1-219ENST00000491183 MYO16Q9Y6X6 1858 aa19.06■□□□□ 0.64
HMGN1-219ENST00000491183 HHLA1C9JL84 531 aa19.06■□□□□ 0.64
HMGN1-219ENST00000491183 CILPO75339 1184 aa19.06■□□□□ 0.64
HMGN1-219ENST00000491183 NFATC1O95644 943 aa19.06■□□□□ 0.64
HMGN1-219ENST00000491183 MBL2P11226 248 aaPredicted RBP19.06■□□□□ 0.64
HMGN1-219ENST00000491183 CD58P19256 250 aa19.06■□□□□ 0.64
HMGN1-219ENST00000491183 ADORA2BP29275 332 aa19.06■□□□□ 0.64
HMGN1-219ENST00000491183 OPRD1P41143 372 aa19.06■□□□□ 0.64
HMGN1-219ENST00000491183 ZC3H3Q8IXZ2 948 aaKnown RBP19.06■□□□□ 0.64
HMGN1-219ENST00000491183 CYFIP2Q96F07 1278 aa19.06■□□□□ 0.64
HMGN1-219ENST00000491183 ZFRQ96KR1 1074 aaKnown RBP19.06■□□□□ 0.64
HMGN1-219ENST00000491183 NT5C1AQ9BXI3 368 aa19.06■□□□□ 0.64
HMGN1-219ENST00000491183 CCSER2Q9H7U1 834 aa19.06■□□□□ 0.64
HMGN1-219ENST00000491183 CFAP97Q9P2B7 532 aa19.06■□□□□ 0.64
HMGN1-219ENST00000491183 MYOFQ9NZM1 2061 aa19.05■□□□□ 0.64
HMGN1-219ENST00000491183 SPTBN4Q9H254 2564 aa19.05■□□□□ 0.64
HMGN1-219ENST00000491183 FRYLO94915 3013 aa19.05■□□□□ 0.64
HMGN1-219ENST00000491183 ATG13O75143 517 aa19.05■□□□□ 0.64
HMGN1-219ENST00000491183 SMC2O95347 1197 aa19.05■□□□□ 0.64
HMGN1-219ENST00000491183 EPB41P11171 864 aaKnown RBP19.05■□□□□ 0.64
HMGN1-219ENST00000491183 TGM1P22735 817 aa19.05■□□□□ 0.64
HMGN1-219ENST00000491183 ID4P47928 161 aa19.05■□□□□ 0.64
HMGN1-219ENST00000491183 LPAL2Q16609 132 aa19.05■□□□□ 0.64
HMGN1-219ENST00000491183 HECTD3Q5T447 861 aa19.05■□□□□ 0.64
HMGN1-219ENST00000491183 CLEC20AQ6ZU45 233 aa19.05■□□□□ 0.64
HMGN1-219ENST00000491183 GPRIN1Q7Z2K8 1008 aa19.05■□□□□ 0.64
HMGN1-219ENST00000491183 SMARCE1Q969G3 411 aa19.05■□□□□ 0.64
HMGN1-219ENST00000491183 RAB20Q9NX57 234 aa19.05■□□□□ 0.64
HMGN1-219ENST00000491183 KIAA1549LQ6ZVL6 1849 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 TRIM49BA6NDI0 452 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 ANTXRLA6NF34 631 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 CYP17A1P05093 508 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 FAM200BP0CF97 657 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 CNR2P34972 360 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 PXNP49023 591 aaPredicted RBP19.04■□□□□ 0.64
HMGN1-219ENST00000491183 MXI1P50539 228 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 SIM2Q14190 667 aaPredicted RBP19.04■□□□□ 0.64
HMGN1-219ENST00000491183 DHCR24Q15392 516 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 FBXO43Q4G163 708 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 ISM2Q6H9L7 571 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 RHBDF2Q6PJF5 856 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 WDR5BQ86VZ2 330 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 CCDC150Q8NCX0 1101 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 FBXL13Q8NEE6 735 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 TATDN2Q93075 761 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 WBP2Q969T9 261 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 EXOC4Q96A65 974 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 RMDN1Q96DB5 314 aa19.04■□□□□ 0.64
HMGN1-219ENST00000491183 SLC9A3R1O14745 358 aaPredicted RBP19.03■□□□□ 0.64
HMGN1-219ENST00000491183 TUBP50607 506 aa19.03■□□□□ 0.64
HMGN1-219ENST00000491183 FKBP3Q00688 224 aaKnown RBP19.03■□□□□ 0.64
HMGN1-219ENST00000491183 CBWD6Q4V339 395 aa19.03■□□□□ 0.64
HMGN1-219ENST00000491183 ZNF394Q53GI3 561 aa19.03■□□□□ 0.64
HMGN1-219ENST00000491183 CBWD3Q5JTY5 395 aa19.03■□□□□ 0.64
HMGN1-219ENST00000491183 CBWD5Q5RIA9 395 aa19.03■□□□□ 0.64
HMGN1-219ENST00000491183 PRR23BQ6ZRT6 265 aa19.03■□□□□ 0.64
HMGN1-219ENST00000491183 DDX42Q86XP3 938 aaKnown RBP eCLIP19.03■□□□□ 0.644e-6■□□□□ 10.9
HMGN1-219ENST00000491183 RPLP0P6Q8NHW5 317 aa19.03■□□□□ 0.64
HMGN1-219ENST00000491183 FAXDC2Q96IV6 333 aa19.03■□□□□ 0.64
HMGN1-219ENST00000491183 TSG101Q99816 390 aa19.03■□□□□ 0.64
HMGN1-219ENST00000491183 FBXO44Q9H4M3 255 aa19.03■□□□□ 0.64
HMGN1-219ENST00000491183 SLC8A2Q9UPR5 921 aa19.03■□□□□ 0.64
HMGN1-219ENST00000491183 E2F8A0AVK6 867 aa19.02■□□□□ 0.64
HMGN1-219ENST00000491183 K7EQS6 105 aa19.02■□□□□ 0.64
HMGN1-219ENST00000491183 STX10O60499 249 aa19.02■□□□□ 0.64
HMGN1-219ENST00000491183 CD44P16070 742 aaKnown RBP19.02■□□□□ 0.64
HMGN1-219ENST00000491183 SLC6A11P48066 632 aa19.02■□□□□ 0.64
HMGN1-219ENST00000491183 PPP1R26Q5T8A7 1209 aaPredicted RBP19.02■□□□□ 0.64
HMGN1-219ENST00000491183 LAIR1Q6GTX8 287 aa19.02■□□□□ 0.64
HMGN1-219ENST00000491183 ELOA2Q8IYF1 753 aaPredicted RBP19.02■□□□□ 0.64
HMGN1-219ENST00000491183 SECISBP2LQ93073 1101 aaKnown RBP19.02■□□□□ 0.64
HMGN1-219ENST00000491183 JAKMIP2Q96AA8 810 aa19.02■□□□□ 0.64
HMGN1-219ENST00000491183 ARID3AQ99856 593 aa19.02■□□□□ 0.64
HMGN1-219ENST00000491183 PARD6AQ9NPB6 346 aa19.02■□□□□ 0.64
HMGN1-219ENST00000491183 CISHQ9NSE2 258 aa19.02■□□□□ 0.64
HMGN1-219ENST00000491183 OSER1Q9NX31 292 aa19.02■□□□□ 0.64
HMGN1-219ENST00000491183 MAN1B1Q9UKM7 699 aa19.02■□□□□ 0.64
HMGN1-219ENST00000491183 RAB23Q9ULC3 237 aa19.02■□□□□ 0.64
HMGN1-219ENST00000491183 SCML2Q9UQR0 700 aa19.02■□□□□ 0.64
HMGN1-219ENST00000491183 COQ4Q9Y3A0 265 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms