RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 KLHL11Q9NVR0 708 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 PAG1Q9NWQ8 432 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 ASB6Q9NWX5 421 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 CWC25Q9NXE8 425 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 TRMT1Q9NXH9 659 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 CWC15Q9P013 229 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 IFNKQ9P0W0 207 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 MYO1AQ9UBC5 1043 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 DBNLQ9UJU6 430 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 ZNF215Q9UL58 517 aaPredicted RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 CDYLQ9Y232 598 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 HPSEQ9Y251 543 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 PCDHA13Q9Y5I0 950 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 SRPRBQ9Y5M8 271 aaKnown RBP2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 MRFAP1Q9Y605 127 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 HS3ST4Q9Y661 456 aa2.28□□□□□ -2.04
SNRNP40-207ENST00000491106 FMN2Q9NZ56 1722 aa2.28□□□□□ -2.05
SNRNP40-207ENST00000491106 DIP2AQ14689 1571 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 ADAMTS13Q76LX8 1427 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 ANKARQ7Z5J8 1434 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 MYH6P13533 1939 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 PNPLA7Q6ZV29 1317 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 A0A1B0GUL7 405 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 GRID2IPA4D2P6 1211 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 CCDC151A5D8V7 595 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 FAM171A2A8MVW0 826 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 F5H697 171 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 TULP2O00295 520 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 GOLIM4O00461 696 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 MAP2K7O14733 419 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 NPHP1O15259 732 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 YY2O15391 372 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 JAK2O60674 1132 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 IGSF3O75054 1194 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 ERLIN1O75477 346 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 WDHD1O75717 1129 aaPredicted RBP2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 AGFG2O95081 481 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 SMC2O95347 1197 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 BMP15O95972 392 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 ANXA1P04083 346 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 UQCRFS1P1P0C7P4 283 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 MTHFD1P11586 935 aaKnown RBP2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 MYL6BP14649 208 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 ALOX15P16050 662 aaPredicted RBP2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 PRLRP16471 622 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 XBP1P17861 261 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 FPR1P21462 350 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 HOXA7P31268 230 aaPredicted RBP2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 CYP2C19P33261 490 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 MPLP40238 635 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 RCAN1P53805 252 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 SLC16A1P53985 500 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 HNRNPH2P55795 449 aaKnown RBP2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 MYL5Q02045 173 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 SRSF4Q08170 494 aaKnown RBP2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 SLC20A2Q08357 652 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 ITKQ08881 620 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 FOXI1Q12951 378 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 SF3B3Q15393 1217 aaKnown RBP2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 SRSF7Q16629 238 aaKnown RBP eCLIP2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 PROSER3Q2NL68 480 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 MST1LQ2TV78 715 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 CD300EQ496F6 205 aaPredicted RBP2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 LONRF3Q496Y0 759 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 HSP90AB3PQ58FF7 597 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 TSTD2Q5T7W7 516 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 AGAP9Q5VTM2 703 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 SPATA1Q5VX52 437 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 RNF219Q5W0B1 726 aaPredicted RBP2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 RESP18Q5W5W9 173 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 SPECC1LQ69YQ0 1117 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 SDE2Q6IQ49 451 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 ARMCX5Q6P1M9 558 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 CTR9Q6PD62 1173 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 KRBA2Q6ZNG9 492 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 TSHZ1Q6ZSZ6 1077 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 RSRC2Q7L4I2 434 aaKnown RBP2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 ZNF589Q86UQ0 364 aaPredicted RBP2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 VSTM4Q8IW00 320 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 PDILTQ8N807 584 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 FANCBQ8NB91 859 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 B3GALNT2Q8NCR0 500 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 SIMC1Q8NDZ2 872 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 CNNM3Q8NE01 707 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 SPATA20Q8TB22 786 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 COG1Q8WTW3 980 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 NRG4Q8WWG1 115 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 TFAP2BQ92481 460 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 RAB24Q969Q5 203 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 EXOC4Q96A65 974 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 BOD1Q96IK1 185 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 RPGRIP1Q96KN7 1286 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 TCEANC2Q96MN5 208 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 GSDMAQ96QA5 445 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 PANX2Q96RD6 677 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 MAP3K14Q99558 947 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 BAG1Q99933 345 aaPredicted RBP2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 ISCA1Q9BUE6 129 aa2.27□□□□□ -2.05
SNRNP40-207ENST00000491106 NUP58Q9BVL2 599 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms