RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 ARIH2O95376 493 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 HDCP19113 662 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 TBC1D1Q86TI0 1168 aaPredicted RBP14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 PIGZQ86VD9 579 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 PPFIBP2Q8ND30 876 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 ZNF296Q8WUU4 475 aaPredicted RBP14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 ARHGAP28Q9P2N2 729 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 SLC27A5Q9Y2P5 690 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 TLL2Q9Y6L7 1015 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 PSTPIP1O43586 416 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 ANXA9O76027 345 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 CCL5P13501 91 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 LAMB3Q13751 1172 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 MAP7Q14244 749 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 GRB14Q14449 540 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 TFDP3Q5H9I0 405 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 ZDHHC17Q8IUH5 632 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 C18orf25Q96B23 403 aaPredicted RBP14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 VCPIP1Q96JH7 1222 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 CYTH2Q99418 400 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 XPO7Q9UIA9 1087 aaKnown RBP14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 CAPN6Q9Y6Q1 641 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 NPR3P17342 541 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 ITIH2P19823 946 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 ATP5C1P36542 298 aaKnown RBP14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 MNAT1P51948 309 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 WDR59Q6PJI9 974 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 TPX2Q9ULW0 747 aaKnown RBP14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 NEU2Q9Y3R4 380 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 LRRC10BA6NIK2 292 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 SCAMP3O14828 347 aaKnown RBP14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 TRIM66O15016 1216 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 SYNCRIPO60506 623 aaKnown RBP14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 HSPA4LO95757 839 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 PAX3P23760 479 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 ARL2P36404 184 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 OLFML2BQ68BL8 750 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 TSHZ1Q6ZSZ6 1077 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 PTPRN2Q92932 1015 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 TTPALQ9BTX7 342 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 XPNPEP1Q9NQW7 623 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 RBM12Q9NTZ6 932 aaKnown RBP14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 C4BP0C0L5 1744 aa14.94□□□□□ -0.02
ARHGEF39-205ENST00000490638 CSH1P0DML2 217 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 CSH2P0DML3 217 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 NPY5RQ15761 445 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 JAMLQ86YT9 394 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 PAWRQ96IZ0 340 aaKnown RBP14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 ADAM33Q9BZ11 813 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 ASAH2Q9NR71 780 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 RNF186Q9NXI6 227 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 SETD1AO15047 1707 aaKnown RBP14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 ZNF263O14978 683 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 LAG3P18627 525 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 NR1D1P20393 614 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 COPS2P61201 443 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 RHOAP61586 193 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 UGP2Q16851 508 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 FASTKD1Q53R41 847 aaKnown RBP14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 RASSF3Q86WH2 238 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 FBXL5Q9UKA1 691 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 GABRQQ9UN88 632 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 DDX3XO00571 662 aaKnown RBP eCLIP14.93□□□□□ -0.027e-8■■■■■ 41.7
ARHGEF39-205ENST00000490638 LZTS3O60299 673 aaPredicted RBP14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 RALBP11234 206 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 NDUFV1P49821 464 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 SLC6A3Q01959 620 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 PTK7Q13308 1070 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 RCN2Q14257 317 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 BMT2Q1RMZ1 405 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 PHLDB3Q6NSJ2 640 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 FBXO38Q6PIJ6 1188 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 ATG4AQ8WYN0 398 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 USP13Q92995 863 aaPredicted RBP14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 HSFY1Q96LI6 401 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 KCTD10Q9H3F6 313 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 TLE6Q9H808 572 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 SLC25A13Q9UJS0 675 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 CHMP2BQ9UQN3 213 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 PKP3Q9Y446 797 aa14.93□□□□□ -0.02
ARHGEF39-205ENST00000490638 RAMP2O60895 175 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 LGR5O75473 907 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 ACRP10323 421 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 SP100P23497 879 aaPredicted RBP14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 OCRLQ01968 901 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 BLOC1S5Q8TDH9 187 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 COG1Q8WTW3 980 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 UBXN6Q9BZV1 441 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 SYNDIG1Q9H7V2 258 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 ARVCFO00192 962 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 OR1E1P30953 314 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 TUBP50607 506 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 SPARCL1Q14515 664 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 ATG16L1Q676U5 607 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 EPS8L1Q8TE68 723 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 APBB2Q92870 758 aa14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 ZNF669Q96BR6 464 aaPredicted RBP14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 CELF6Q96J87 481 aaKnown RBP14.92□□□□□ -0.02
ARHGEF39-205ENST00000490638 POPDC2Q9HBU9 364 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms