RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 PAK1Q13153 545 aa20.9■□□□□ 0.94
SMC4-222ENST00000490207 EML3Q32P44 896 aa20.9■□□□□ 0.94
SMC4-222ENST00000490207 ZNF394Q53GI3 561 aa20.9■□□□□ 0.94
SMC4-222ENST00000490207 FOXR2Q6PJQ5 311 aa20.9■□□□□ 0.94
SMC4-222ENST00000490207 TATDN2Q93075 761 aa20.9■□□□□ 0.94
SMC4-222ENST00000490207 JAKMIP2Q96AA8 810 aa20.9■□□□□ 0.94
SMC4-222ENST00000490207 CHFRQ96EP1 664 aa20.9■□□□□ 0.94
SMC4-222ENST00000490207 FBXO44Q9H4M3 255 aa20.9■□□□□ 0.94
SMC4-222ENST00000490207 ECT2Q9H8V3 914 aa20.9■□□□□ 0.94
SMC4-222ENST00000490207 CISHQ9NSE2 258 aa20.9■□□□□ 0.94
SMC4-222ENST00000490207 KIAA1549LQ6ZVL6 1849 aa20.9■□□□□ 0.94
SMC4-222ENST00000490207 FAM92AA1XBS5 289 aa20.89■□□□□ 0.93
SMC4-222ENST00000490207 CCINQ13939 588 aa20.89■□□□□ 0.93
SMC4-222ENST00000490207 GAS6Q14393 721 aa20.89■□□□□ 0.93
SMC4-222ENST00000490207 PPP2R5DQ14738 602 aa20.89■□□□□ 0.93
SMC4-222ENST00000490207 TSSK4Q6SA08 328 aa20.89■□□□□ 0.93
SMC4-222ENST00000490207 Q6ZS52 159 aa20.89■□□□□ 0.93
SMC4-222ENST00000490207 GPRIN1Q7Z2K8 1008 aa20.89■□□□□ 0.93
SMC4-222ENST00000490207 SEMA4AQ9H3S1 761 aa20.89■□□□□ 0.93
SMC4-222ENST00000490207 FAM124BQ9H5Z6 455 aaPredicted RBP20.89■□□□□ 0.93
SMC4-222ENST00000490207 SMPD4Q9NXE4 827 aa20.89■□□□□ 0.93
SMC4-222ENST00000490207 NFATC1O95644 943 aa20.88■□□□□ 0.93
SMC4-222ENST00000490207 GJA4P35212 333 aa20.88■□□□□ 0.93
SMC4-222ENST00000490207 FMO5P49326 533 aa20.88■□□□□ 0.93
SMC4-222ENST00000490207 TUBP50607 506 aa20.88■□□□□ 0.93
SMC4-222ENST00000490207 STX17P56962 302 aa20.88■□□□□ 0.93
SMC4-222ENST00000490207 CUL2Q13617 745 aa20.88■□□□□ 0.93
SMC4-222ENST00000490207 CAMK4Q16566 473 aa20.88■□□□□ 0.93
SMC4-222ENST00000490207 TMEM196Q5HYL7 178 aa20.88■□□□□ 0.93
SMC4-222ENST00000490207 HECTD3Q5T447 861 aa20.88■□□□□ 0.93
SMC4-222ENST00000490207 PPP1R26Q5T8A7 1209 aaPredicted RBP20.88■□□□□ 0.93
SMC4-222ENST00000490207 SNX30Q5VWJ9 437 aa20.88■□□□□ 0.93
SMC4-222ENST00000490207 MAMSTRQ6ZN01 415 aa20.88■□□□□ 0.93
SMC4-222ENST00000490207 DDX42Q86XP3 938 aaKnown RBP eCLIP20.88■□□□□ 0.93
SMC4-222ENST00000490207 SPEM1Q8N4L4 309 aa20.88■□□□□ 0.93
SMC4-222ENST00000490207 TRIML1Q8N9V2 468 aa20.88■□□□□ 0.93
SMC4-222ENST00000490207 CCSER2Q9H7U1 834 aa20.88■□□□□ 0.93
SMC4-222ENST00000490207 PNPLA8Q9NP80 782 aa20.88■□□□□ 0.93
SMC4-222ENST00000490207 CHORDC1Q9UHD1 332 aaPredicted RBP20.88■□□□□ 0.93
SMC4-222ENST00000490207 HHLA1C9JL84 531 aa20.87■□□□□ 0.93
SMC4-222ENST00000490207 TRDMT1O14717 391 aaKnown RBP20.87■□□□□ 0.93
SMC4-222ENST00000490207 COCHO43405 550 aa20.87■□□□□ 0.93
SMC4-222ENST00000490207 ZDHHC11BP0C7U3 371 aa20.87■□□□□ 0.93
SMC4-222ENST00000490207 SATB1Q01826 763 aa20.87■□□□□ 0.93
SMC4-222ENST00000490207 GRSF1Q12849 480 aaKnown RBP eCLIP20.87■□□□□ 0.93
SMC4-222ENST00000490207 NR1H3Q13133 447 aa20.87■□□□□ 0.93
SMC4-222ENST00000490207 FSTL4Q6MZW2 842 aa20.87■□□□□ 0.93
SMC4-222ENST00000490207 SYNPOQ8N3V7 929 aa20.87■□□□□ 0.93
SMC4-222ENST00000490207 KIAA1958Q8N8K9 716 aa20.87■□□□□ 0.93
SMC4-222ENST00000490207 SLC4A11Q8NBS3 891 aa20.87■□□□□ 0.93
SMC4-222ENST00000490207 EXOC4Q96A65 974 aa20.87■□□□□ 0.93
SMC4-222ENST00000490207 TMEM176AQ96HP8 235 aa20.87■□□□□ 0.93
SMC4-222ENST00000490207 HEXIM2Q96MH2 286 aaKnown RBP20.87■□□□□ 0.93
SMC4-222ENST00000490207 TLR8Q9NR97 1041 aaKnown RBP20.87■□□□□ 0.93
SMC4-222ENST00000490207 ZSCAN32Q9NX65 697 aa20.87■□□□□ 0.93
SMC4-222ENST00000490207 KIAA1468Q9P260 1216 aa20.87■□□□□ 0.93
SMC4-222ENST00000490207 CFAP97Q9P2B7 532 aa20.87■□□□□ 0.93
SMC4-222ENST00000490207 PCDHGA2Q9Y5H1 932 aa20.87■□□□□ 0.93
SMC4-222ENST00000490207 ZFHX2Q9C0A1 2572 aaPredicted RBP20.86■□□□□ 0.93
SMC4-222ENST00000490207 LMNAP02545 664 aaKnown RBP20.86■□□□□ 0.93
SMC4-222ENST00000490207 ACO1P21399 889 aaKnown RBP20.86■□□□□ 0.93
SMC4-222ENST00000490207 RAD23BP54727 409 aa20.86■□□□□ 0.93
SMC4-222ENST00000490207 YWHAEP62258 255 aaKnown RBP20.86■□□□□ 0.93
SMC4-222ENST00000490207 P2RY13Q9BPV8 354 aa20.86■□□□□ 0.93
SMC4-222ENST00000490207 DUSP16Q9BY84 665 aa20.86■□□□□ 0.93
SMC4-222ENST00000490207 FAM126AQ9BYI3 521 aaPredicted RBP20.86■□□□□ 0.93
SMC4-222ENST00000490207 LINC00597Q9H2U6 94 aa20.86■□□□□ 0.93
SMC4-222ENST00000490207 SLC9A3R1O14745 358 aaPredicted RBP20.85■□□□□ 0.93
SMC4-222ENST00000490207 SCAMP3O14828 347 aaKnown RBP20.85■□□□□ 0.93
SMC4-222ENST00000490207 CYP26A1O43174 497 aa20.85■□□□□ 0.93
SMC4-222ENST00000490207 TLR5O60602 858 aa20.85■□□□□ 0.93
SMC4-222ENST00000490207 GNA14O95837 355 aa20.85■□□□□ 0.93
SMC4-222ENST00000490207 TDGF1P13385 188 aa20.85■□□□□ 0.93
SMC4-222ENST00000490207 TBXAS1P24557 533 aaPredicted RBP20.85■□□□□ 0.93
SMC4-222ENST00000490207 CXCL12P48061 93 aa20.85■□□□□ 0.93
SMC4-222ENST00000490207 LRMPQ12912 555 aa20.85■□□□□ 0.93
SMC4-222ENST00000490207 ZBTB44Q8NCP5 570 aa20.85■□□□□ 0.93
SMC4-222ENST00000490207 ATRIPQ8WXE1 791 aa20.85■□□□□ 0.93
SMC4-222ENST00000490207 NELL1Q92832 810 aa20.85■□□□□ 0.93
SMC4-222ENST00000490207 CD101Q93033 1021 aa20.85■□□□□ 0.93
SMC4-222ENST00000490207 ZFRQ96KR1 1074 aaKnown RBP20.85■□□□□ 0.93
SMC4-222ENST00000490207 NACA2Q9H009 215 aa20.85■□□□□ 0.93
SMC4-222ENST00000490207 SCML2Q9UQR0 700 aa20.85■□□□□ 0.93
SMC4-222ENST00000490207 PMM2O15305 246 aa20.84■□□□□ 0.93
SMC4-222ENST00000490207 EGFP01133 1207 aa20.84■□□□□ 0.93
SMC4-222ENST00000490207 DRD1P21728 446 aa20.84■□□□□ 0.93
SMC4-222ENST00000490207 PGFP49763 221 aa20.84■□□□□ 0.93
SMC4-222ENST00000490207 GALK1P51570 392 aa20.84■□□□□ 0.93
SMC4-222ENST00000490207 ARHGAP17Q68EM7 881 aa20.84■□□□□ 0.93
SMC4-222ENST00000490207 NAIF1Q69YI7 327 aaPredicted RBP20.84■□□□□ 0.93
SMC4-222ENST00000490207 UBR7Q8N806 425 aa20.84■□□□□ 0.93
SMC4-222ENST00000490207 NT5C1BQ96P26 610 aa20.84■□□□□ 0.93
SMC4-222ENST00000490207 SRRTQ9BXP5 876 aaKnown RBP20.84■□□□□ 0.93
SMC4-222ENST00000490207 P4HA2O15460 535 aa20.83■□□□□ 0.93
SMC4-222ENST00000490207 LILRB5O75023 590 aa20.83■□□□□ 0.93
SMC4-222ENST00000490207 PAPSS2O95340 614 aaPredicted RBP20.83■□□□□ 0.93
SMC4-222ENST00000490207 CYP17A1P05093 508 aa20.83■□□□□ 0.93
SMC4-222ENST00000490207 IRF1P10914 325 aa20.83■□□□□ 0.93
SMC4-222ENST00000490207 KIF11P52732 1056 aa20.83■□□□□ 0.93
SMC4-222ENST00000490207 NRLP54845 237 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms