RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 CARD9Q9H257 536 aa14.86□□□□□ -0.03
VPS26A-205ENST00000489656 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.86□□□□□ -0.03
VPS26A-205ENST00000489656 ABI2Q9NYB9 513 aaPredicted RBP14.86□□□□□ -0.03
VPS26A-205ENST00000489656 FNIP2Q9P278 1114 aa14.86□□□□□ -0.03
VPS26A-205ENST00000489656 RNF14Q9UBS8 474 aa14.86□□□□□ -0.03
VPS26A-205ENST00000489656 PACSIN2Q9UNF0 486 aaPredicted RBP14.86□□□□□ -0.03
VPS26A-205ENST00000489656 PCDHA3Q9Y5H8 950 aa14.86□□□□□ -0.03
VPS26A-205ENST00000489656 WDR27A2RRH5 827 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 LCHNA4D1U4 455 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 LINC01553A4QN01 128 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 C5orf67F2Z3F1 127 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 PSTPIP1O43586 416 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 DAB1O75553 588 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 ABLIM3O94929 683 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 CTSAP10619 480 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 HAPLN1P10915 354 aaPredicted RBP14.85□□□□□ -0.03
VPS26A-205ENST00000489656 PSMA2P25787 234 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 FLT3P36888 993 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 BMPR1AP36894 532 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 GRIK1P39086 918 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 PTPN9P43378 593 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 PEX5P50542 639 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 C9orf50Q5SZB4 431 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 LRRC38Q5VT99 294 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 TRNP1Q6NT89 227 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 RNF19BQ6ZMZ0 732 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 BEND5Q7L4P6 421 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 EMC1Q8N766 993 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 CLEC4CQ8WTT0 213 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 RXFP2Q8WXD0 754 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 RNF25Q96BH1 459 aaPredicted RBP14.85□□□□□ -0.03
VPS26A-205ENST00000489656 ULBP1Q9BZM6 244 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 RXFP1Q9HBX9 757 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 COMMD8Q9NX08 183 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 IL37Q9NZH6 218 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 AFF4Q9UHB7 1163 aaKnown RBP14.85□□□□□ -0.03
VPS26A-205ENST00000489656 MAFFQ9ULX9 164 aa14.85□□□□□ -0.03
VPS26A-205ENST00000489656 KCNK3O14649 394 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 RIOK3O14730 519 aaKnown RBP14.84□□□□□ -0.03
VPS26A-205ENST00000489656 ADAM12O43184 909 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 ZBED1O96006 694 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 PYGBP11216 843 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 PDGFRAP16234 1089 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 OR1D2P34982 312 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 PCK1P35558 622 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 NDUFV1P49821 464 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 UBE3AQ05086 875 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 RAB33AQ14088 237 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 TAF5Q15542 800 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 BHLHA9Q7RTU4 235 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 ZNF572Q7Z3I7 529 aaPredicted RBP14.84□□□□□ -0.03
VPS26A-205ENST00000489656 POLNQ7Z5Q5 900 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 CPNE8Q86YQ8 564 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 CREG2Q8IUH2 290 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 RHOT1Q8IXI2 618 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 KLHL23Q8NBE8 558 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 ATAD1Q8NBU5 361 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 SPATA17Q96L03 361 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 RNPC3Q96LT9 517 aaKnown RBP14.84□□□□□ -0.03
VPS26A-205ENST00000489656 SAMD11Q96NU1 681 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 SLC2A13Q96QE2 648 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 C11orf84Q9BUA3 381 aaPredicted RBP14.84□□□□□ -0.03
VPS26A-205ENST00000489656 DDX23Q9BUQ8 820 aaKnown RBP14.84□□□□□ -0.03
VPS26A-205ENST00000489656 TRIM62Q9BVG3 475 aa14.84□□□□□ -0.03
VPS26A-205ENST00000489656 MRPL17Q9NRX2 175 aaKnown RBP14.84□□□□□ -0.03
VPS26A-205ENST00000489656 FAM92AA1XBS5 289 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 SRGAP2O75044 1071 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 LRCH4O75427 683 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 RB1P06400 928 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 DESP17661 470 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 SDC4P31431 198 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 MATKP42679 507 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 RABGGTBP53611 331 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 SLC5A3P53794 718 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 ARPP19P56211 112 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 RNASE9P60153 205 aaKnown RBP14.83□□□□□ -0.04
VPS26A-205ENST00000489656 RPL10AP62906 217 aaKnown RBP14.83□□□□□ -0.04
VPS26A-205ENST00000489656 YWHAZP63104 245 aaKnown RBP14.83□□□□□ -0.04
VPS26A-205ENST00000489656 CKAP4Q07065 602 aaKnown RBP14.83□□□□□ -0.04
VPS26A-205ENST00000489656 SHHQ15465 462 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 PTPROQ16827 1216 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 CCDC14Q49A88 953 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 DCAF12L1Q5VU92 463 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 CC2D1AQ6P1N0 951 aaPredicted RBP14.83□□□□□ -0.04
VPS26A-205ENST00000489656 SCN4BQ8IWT1 228 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 NUP93Q8N1F7 819 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 RASGEF1CQ8N431 466 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 CEP112Q8N8E3 955 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 ZNF461Q8TAF7 563 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 COG1Q8WTW3 980 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 CENPIQ92674 756 aaPredicted RBP14.83□□□□□ -0.04
VPS26A-205ENST00000489656 ALG3Q92685 438 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 KRT35Q92764 455 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 NT5C3BQ969T7 300 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 PGLYRP2Q96PD5 576 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 POPDC2Q9HBU9 364 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 RRN3Q9NYV6 651 aa14.83□□□□□ -0.04
VPS26A-205ENST00000489656 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.83□□□□□ -0.04
VPS26A-205ENST00000489656 TTC7AQ9ULT0 858 aaPredicted RBP14.83□□□□□ -0.04
VPS26A-205ENST00000489656 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms