RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ERBB2P04626 1255 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 ITGB3P05106 788 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 NFICP08651 508 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 KRT19P08727 400 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 IQCF3P0C7M6 154 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 SMIM10L2AP0DMW4 78 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 SMIM10L2BP0DMW5 78 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 RALAP11233 206 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 KRT3P12035 628 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 CD58P19256 250 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 FSHRP23945 695 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 BRD2P25440 801 aaKnown RBP8.88□□□□□ -0.99
VTI1A-207ENST00000489357 IVDP26440 423 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 PNPLA4P41247 253 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 YARSP54577 528 aaKnown RBP8.88□□□□□ -0.99
VTI1A-207ENST00000489357 HNRNPH2P55795 449 aaKnown RBP8.88□□□□□ -0.99
VTI1A-207ENST00000489357 PPP2R2AP63151 447 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 ZNF200P98182 395 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-207ENST00000489357 LAPTM4AQ15012 233 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 SLC10A6Q3KNW5 377 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 KRT71Q3SY84 523 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 SEZ6Q53EL9 994 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 DNAJC21Q5F1R6 531 aaKnown RBP8.88□□□□□ -0.99
VTI1A-207ENST00000489357 JADE1Q6IE81 842 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 LCLAT1Q6UWP7 414 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 LRRC31Q6UY01 552 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 TAOK1Q7L7X3 1001 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 ADAT2Q7Z6V5 191 aaKnown RBP8.88□□□□□ -0.99
VTI1A-207ENST00000489357 PCGF5Q86SE9 256 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 SERINC5Q86VE9 423 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 PASD1Q8IV76 773 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 KIAA0319LQ8IZA0 1049 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 NME8Q8N427 588 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 RIBC1Q8N443 379 aaPredicted RBP8.88□□□□□ -0.99
VTI1A-207ENST00000489357 WDTC1Q8N5D0 677 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 SLC4A11Q8NBS3 891 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 MCRS1Q96EZ8 462 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 HPDLQ96IR7 371 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 TTC25Q96NG3 672 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 SERPINB12Q96P63 405 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 MCEEQ96PE7 176 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 SLITRK1Q96PX8 696 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 EPN3Q9H201 632 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 PRDM16Q9HAZ2 1276 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 ASIC3Q9UHC3 531 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 SLC12A6Q9UHW9 1150 aa8.88□□□□□ -0.99
VTI1A-207ENST00000489357 RANBP2P49792 3224 aaKnown RBP8.87□□□□□ -0.99
VTI1A-207ENST00000489357 CITO14578 2027 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 TCRBV7S2A1N4TA0A589 114 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 O00370 1275 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 EBAG9O00559 213 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 RIPK2O43353 540 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 LIASO43766 372 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 ZNF189O75820 626 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-207ENST00000489357 RNF8O76064 485 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 FAM107AO95990 144 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 KRT1P04264 644 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 ABHD2P08910 425 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 GNAT1P11488 350 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 CD19P15391 556 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 CYP3A5P20815 502 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 LSP1P33241 339 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 FLT3P36888 993 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 TAS2R40P59535 323 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 GNGT1P63211 74 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 IGBP1P78318 339 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 CBLBQ13191 982 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 PTK7Q13308 1070 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 RASA2Q15283 850 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 ZBTB6Q15916 424 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 PTPN20Q4JDL3 420 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 TNFAIP8L3Q5GJ75 292 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 AADACL2Q6P093 401 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 SPOCD1Q6ZMY3 1216 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 FAM43BQ6ZT52 329 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-207ENST00000489357 MICALCLQ6ZW33 695 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 BBS12Q6ZW61 710 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 CEP120Q8N960 986 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 BEST2Q8NFU1 509 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 PPP1R13LQ8WUF5 828 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 TFAP2BQ92481 460 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 WNT8BQ93098 351 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 CCDC77Q9BR77 488 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 NT5C1AQ9BXI3 368 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 TRIM31Q9BZY9 425 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 TRIM7Q9C029 511 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 ADAMTS10Q9H324 1103 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 EPB41L4BQ9H329 900 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 PCDH9Q9HC56 1237 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 PRDM5Q9NQX1 630 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-207ENST00000489357 TMEM39AQ9NV64 488 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 SETD4Q9NVD3 440 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 ASNSD1Q9NWL6 643 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 DPP3Q9NY33 737 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 CNTN3Q9P232 1028 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 NXF1Q9UBU9 619 aaKnown RBP8.87□□□□□ -0.99
VTI1A-207ENST00000489357 CHORDC1Q9UHD1 332 aaPredicted RBP8.87□□□□□ -0.99
VTI1A-207ENST00000489357 SHOC2Q9UQ13 582 aa8.87□□□□□ -0.99
VTI1A-207ENST00000489357 hCG_1818297A0A087WSY0 165 aa8.86□□□□□ -0.99
VTI1A-207ENST00000489357 C17orf102A2RUQ5 167 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms