RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 TBC1D14Q9P2M4 693 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 RAD54BQ9Y620 910 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 CENPEQ02224 2701 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 ITPR2Q14571 2701 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 CACNA1DQ01668 2161 aa12.39□□□□□ -0.43
HDAC6-233ENST00000489352 FBN2P35556 2912 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 H0Y8X5 98 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 K7ENP7 123 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 CBX4O00257 560 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 SCAMP3O14828 347 aaKnown RBP12.38□□□□□ -0.43
HDAC6-233ENST00000489352 TRIM66O15016 1216 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 TULP3O75386 442 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 NOL4O94818 638 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 CYP11A1P05108 521 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 ITGAVP06756 1048 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 HMGB1P09429 215 aaKnown RBP12.38□□□□□ -0.43
HDAC6-233ENST00000489352 CXCL8P10145 99 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 PFKLP17858 780 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 C21orf59P57076 290 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 NOLC1Q14978 699 aaKnown RBP eCLIP12.38□□□□□ -0.43
HDAC6-233ENST00000489352 ANO4Q32M45 955 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 SGO2Q562F6 1265 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 LY6G5CQ5SRR4 150 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 EGFLAMQ63HQ2 1017 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 INO80CQ6PI98 192 aaPredicted RBP12.38□□□□□ -0.43
HDAC6-233ENST00000489352 GATAD2AQ86YP4 633 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 TMEM130Q8N3G9 435 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 HIC2Q96JB3 615 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.38□□□□□ -0.43
HDAC6-233ENST00000489352 LSG1Q9H089 658 aaKnown RBP12.38□□□□□ -0.43
HDAC6-233ENST00000489352 ITM2CQ9NQX7 267 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 WDR70Q9NW82 654 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 TRPM5Q9NZQ8 1165 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 STARD13Q9Y3M8 1113 aa12.38□□□□□ -0.43
HDAC6-233ENST00000489352 CYB561D2O14569 222 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 ABL1P00519 1130 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 SFTPCP11686 197 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 TXKP42681 527 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 GRIA4P48058 902 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 ACADVLP49748 655 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 GUCY2FP51841 1108 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 FOSBP53539 338 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 INHBCP55103 352 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 ERVPABLB-1P60509 514 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 TLE1Q04724 770 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 STRN3Q13033 797 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 ILKQ13418 452 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 CALCRLQ16602 461 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 PIK3AP1Q6ZUJ8 805 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 METTL3Q86U44 580 aaKnown RBP12.37□□□□□ -0.43
HDAC6-233ENST00000489352 DDX42Q86XP3 938 aaKnown RBP eCLIP12.37□□□□□ -0.43
HDAC6-233ENST00000489352 MIB1Q86YT6 1006 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 CACTIN-AS1Q8N1I8 211 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 EID2Q8N6I1 236 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 CCDC97Q96F63 343 aaPredicted RBP12.37□□□□□ -0.43
HDAC6-233ENST00000489352 ACOX2Q99424 681 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 PYM1Q9BRP8 204 aaKnown RBP12.37□□□□□ -0.43
HDAC6-233ENST00000489352 TMEM134Q9H6X4 195 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 TUFT1Q9NNX1 390 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 ANO2Q9NQ90 1003 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 THSD1Q9NS62 852 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 SMPD4Q9NXE4 827 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 CFAP97Q9P2B7 532 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 MAN2B2Q9Y2E5 1009 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 SCN1AP35498 2009 aa12.37□□□□□ -0.43
HDAC6-233ENST00000489352 TLN1Q9Y490 2541 aaKnown RBP12.36□□□□□ -0.43
HDAC6-233ENST00000489352 CLDN3O15551 220 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 DEXIO95424 95 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 MPOP05164 745 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 CLTAP09496 248 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 PROZP22891 400 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 CYP2F1P24903 491 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 AFMP43652 599 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 TPMTP51580 245 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 PEX3P56589 373 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 GABREP78334 506 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 ZXDBP98169 803 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 MAPK8IP2Q13387 824 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-233ENST00000489352 ORC1Q13415 861 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 SAFBQ15424 915 aaKnown RBP eCLIP12.36□□□□□ -0.43
HDAC6-233ENST00000489352 NTRK3Q16288 839 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 GRAMD4Q6IC98 578 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 Q6ZUG5 572 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 SCN4BQ8IWT1 228 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 FAM177A1Q8N128 213 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-233ENST00000489352 PHTF2Q8N3S3 785 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 EXD3Q8N9H8 876 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 PRCCQ92733 491 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-233ENST00000489352 BRF1Q92994 677 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 SKA1Q96BD8 255 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 FAM212AQ96EL1 285 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 ZBTB45Q96K62 511 aaPredicted RBP12.36□□□□□ -0.43
HDAC6-233ENST00000489352 MMS19Q96T76 1030 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 GABRG3Q99928 467 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 STARD5Q9NSY2 213 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 USP36Q9P275 1121 aaKnown RBP12.36□□□□□ -0.43
HDAC6-233ENST00000489352 ADAMTS1Q9UHI8 967 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 CPQQ9Y646 472 aa12.36□□□□□ -0.43
HDAC6-233ENST00000489352 BLACEA4D250 179 aa12.35□□□□□ -0.43
HDAC6-233ENST00000489352 GFRA2O00451 464 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 148 ms