RNA–Protein interactions for RNA: ENST00000489019.6

CALD1-221, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 422 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-221ENST00000489019 CPA1P15085 419 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 KCNA2P16389 499 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 LPOP22079 712 aaPredicted RBP3.29□□□□□ -1.88
CALD1-221ENST00000489019 GNALP38405 381 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 IL15P40933 162 aaPredicted RBP3.29□□□□□ -1.88
CALD1-221ENST00000489019 RFX5P48382 616 aaPredicted RBP3.29□□□□□ -1.88
CALD1-221ENST00000489019 PTH2RP49190 550 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 NEK2P51955 445 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 EPHB1P54762 984 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 TIMM10P62072 90 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 IFIT5Q13325 482 aaKnown RBP3.29□□□□□ -1.88
CALD1-221ENST00000489019 CUL4AQ13619 759 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 PKP1Q13835 747 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 KRT32Q14532 448 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 ANKRD1Q15327 319 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 NFE2Q16621 373 aaPredicted RBP3.29□□□□□ -1.88
CALD1-221ENST00000489019 KLHL40Q2TBA0 621 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 RABL6Q3YEC7 729 aaPredicted RBP3.29□□□□□ -1.88
CALD1-221ENST00000489019 CD300EQ496F6 205 aaPredicted RBP3.29□□□□□ -1.88
CALD1-221ENST00000489019 MCMDC2Q4G0Z9 681 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 PRR16Q569H4 304 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 VPS53Q5VIR6 699 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 SP5Q6BEB4 398 aaPredicted RBP3.29□□□□□ -1.88
CALD1-221ENST00000489019 PPP4R4Q6NUP7 873 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 CAVIN1Q6NZI2 390 aaKnown RBP3.29□□□□□ -1.88
CALD1-221ENST00000489019 USP45Q70EL2 814 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 RUFY3Q7L099 469 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 C14orf80Q86SX3 495 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 ZBTB46Q86UZ6 589 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 FAM90A1Q86YD7 464 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 CCDC83Q8IWF9 413 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 COLGALT2Q8IYK4 626 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 CFAP52Q8N1V2 620 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 SLC17A8Q8NDX2 589 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 FBXO41Q8TF61 875 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 PIGBQ92521 554 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 SYAP1Q96A49 352 aaPredicted RBP3.29□□□□□ -1.88
CALD1-221ENST00000489019 TMEM125Q96AQ2 219 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 TRIM44Q96DX7 344 aaPredicted RBP3.29□□□□□ -1.88
CALD1-221ENST00000489019 HSPBAP1Q96EW2 488 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 FAM227BQ96M60 508 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 C1orf43Q9BWL3 253 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 GTPBP4Q9BZE4 634 aaKnown RBP3.29□□□□□ -1.88
CALD1-221ENST00000489019 RIOX1Q9H6W3 641 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 GRPEL1Q9HAV7 217 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 AASDHPPTQ9NRN7 309 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 CNNM1Q9NRU3 951 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 HMG20BQ9P0W2 317 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 ZNHIT2Q9UHR6 403 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 ISY1Q9ULR0 285 aaKnown RBP3.29□□□□□ -1.88
CALD1-221ENST00000489019 PCDHA3Q9Y5H8 950 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 ATP6V1DQ9Y5K8 247 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 COL14A1Q05707 1796 aaKnown RBP3.29□□□□□ -1.88
CALD1-221ENST00000489019 ABCA3Q99758 1704 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 NHSL1Q5SYE7 1610 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 KCPQ6ZWJ8 1503 aa3.29□□□□□ -1.88
CALD1-221ENST00000489019 COL15A1P39059 1388 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 MAP3K15Q6ZN16 1313 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 TRGV11A0A075B6L2 103 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 PRAMEF33A0A0G2JMD5 474 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 A0A1B0GUL7 405 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 VPS37CA5D8V6 355 aaPredicted RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 ZAR1LA6NP61 321 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 GOLIM4O00461 696 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 STX6O43752 255 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 PRAMEF10O60809 474 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 CAND2O75155 1236 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 EIF3JO75822 258 aaKnown RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 CIAO1O76071 339 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 IL33O95760 270 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 MBD3O95983 291 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 PCCAP05165 728 aaPredicted RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 RPLP2P05387 115 aaKnown RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 KRT18P05783 430 aaKnown RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 GPTP24298 496 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 GJB2P29033 226 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 PRDX5P30044 214 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 PHKA1P46020 1223 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 RAB27AP51159 221 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 MAP2K6P52564 334 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 HK3P52790 923 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 SIM1P81133 766 aaPredicted RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 MCL1Q07820 350 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 ZNF844Q08AG5 666 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 STK3Q13188 491 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 NOGQ13253 232 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 DYRK1AQ13627 763 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 ZNF169Q14929 603 aaPredicted RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 NECTIN1Q15223 517 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 SF3B3Q15393 1217 aaKnown RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 ADCK5Q3MIX3 580 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 LRRC24Q50LG9 513 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 ZNF362Q5T0B9 420 aaPredicted RBP3.28□□□□□ -1.88
CALD1-221ENST00000489019 LDHAL6AQ6ZMR3 332 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 CCDC129Q6ZRS4 1044 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 CLEC17AQ6ZS10 378 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 PRIMA1Q86XR5 153 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 C3orf20Q8ND61 904 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 SIMC1Q8NDZ2 872 aa3.28□□□□□ -1.88
CALD1-221ENST00000489019 SLC30A5Q8TAD4 765 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms