RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 TLDC2A0PJX2 215 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 H3BUI4 141 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 M0R3H8 397 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 MYO1CO00159 1063 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 FOXN3O00409 490 aaPredicted RBP3.48□□□□□ -1.85
CCDC93-209ENST00000488908 NGFRP08138 427 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 TNFRSF1BP20333 461 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 PDCP20941 246 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 MAP2K6P52564 334 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 PRKAG1P54619 331 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 WNT3P56703 355 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 STIM1Q13586 685 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 PLS1Q14651 629 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 KCNB1Q14721 858 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 MANEAQ5SRI9 462 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 CC2D1BQ5T0F9 858 aaKnown RBP3.48□□□□□ -1.85
CCDC93-209ENST00000488908 LINC01465Q8N7H1 131 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 MAFAQ8NHW3 353 aaPredicted RBP3.48□□□□□ -1.85
CCDC93-209ENST00000488908 NR4A3Q92570 626 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 ZNF479Q96JC4 524 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 FAM84BQ96KN1 310 aaPredicted RBP3.48□□□□□ -1.85
CCDC93-209ENST00000488908 MESP1Q9BRJ9 268 aa3.48□□□□□ -1.85
CCDC93-209ENST00000488908 SARS2Q9NP81 518 aaKnown RBP3.48□□□□□ -1.85
CCDC93-209ENST00000488908 SEMA4BQ9NPR2 832 aaPredicted RBP3.48□□□□□ -1.85
CCDC93-209ENST00000488908 CLSTN1O94985 981 aa3.47□□□□□ -1.85
CCDC93-209ENST00000488908 GAS8-AS1O95177 125 aa3.47□□□□□ -1.85
CCDC93-209ENST00000488908 SYF2O95926 243 aaKnown RBP3.47□□□□□ -1.85
CCDC93-209ENST00000488908 KCNA3P22001 575 aa3.47□□□□□ -1.85
CCDC93-209ENST00000488908 CPA2P48052 419 aa3.47□□□□□ -1.85
CCDC93-209ENST00000488908 DIO1P49895 249 aa3.47□□□□□ -1.85
CCDC93-209ENST00000488908 UCP3P55916 312 aa3.47□□□□□ -1.85
CCDC93-209ENST00000488908 ZIK1Q3SY52 487 aaPredicted RBP3.47□□□□□ -1.85
CCDC93-209ENST00000488908 CCDC157Q569K6 752 aa3.47□□□□□ -1.85
CCDC93-209ENST00000488908 KHDC1LQ5JSQ8 128 aa3.47□□□□□ -1.85
CCDC93-209ENST00000488908 C9orf50Q5SZB4 431 aa3.47□□□□□ -1.85
CCDC93-209ENST00000488908 RFX6Q8HWS3 928 aa3.47□□□□□ -1.85
CCDC93-209ENST00000488908 FOXP4Q8IVH2 680 aaPredicted RBP3.47□□□□□ -1.85
CCDC93-209ENST00000488908 SLC25A28Q96A46 364 aa3.47□□□□□ -1.85
CCDC93-209ENST00000488908 SLC35A4Q96G79 324 aa3.47□□□□□ -1.85
CCDC93-209ENST00000488908 TMEM8AQ9HCN3 771 aa3.47□□□□□ -1.85
CCDC93-209ENST00000488908 GAR1Q9NY12 217 aaKnown RBP3.47□□□□□ -1.85
CCDC93-209ENST00000488908 LPAR3Q9UBY5 353 aa3.47□□□□□ -1.85
CCDC93-209ENST00000488908 GABRDO14764 452 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 TACR3P29371 465 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 IL6STP40189 918 aaPredicted RBP3.46□□□□□ -1.86
CCDC93-209ENST00000488908 SLC11A2P49281 568 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 KRTAP10-5P60370 271 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 YPEL5P62699 121 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 NKX6-1P78426 367 aaPredicted RBP3.46□□□□□ -1.86
CCDC93-209ENST00000488908 B4GALNT1Q00973 533 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 ITKQ08881 620 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 ODF1Q14990 250 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 CERCAMQ5T4B2 595 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 GFI1BQ5VTD9 330 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 CAPRIN2Q6IMN6 1127 aaKnown RBP3.46□□□□□ -1.86
CCDC93-209ENST00000488908 PDXDC1Q6P996 788 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 ZNF793Q6ZN11 406 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 USP45Q70EL2 814 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 DDX42Q86XP3 938 aaKnown RBP eCLIP3.46□□□□□ -1.86
CCDC93-209ENST00000488908 PRR18Q8N4B5 295 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 TMEM171Q8WVE6 324 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 TMX1Q9H3N1 280 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 PCDHA6Q9UN73 950 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 DRG1Q9Y295 367 aaKnown RBP3.46□□□□□ -1.86
CCDC93-209ENST00000488908 PRKAB1Q9Y478 270 aa3.46□□□□□ -1.86
CCDC93-209ENST00000488908 IFITM10A6NMD0 228 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 PRSS47A8MTI9 375 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 TMPRSS11DO60235 418 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 ZRANB2O95218 330 aaKnown RBP eCLIP3.45□□□□□ -1.86
CCDC93-209ENST00000488908 THP07101 528 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 CD63P08962 238 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 PGGT1BP53609 377 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 CCNIQ14094 377 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 PRTGQ2VWP7 1150 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 ATG9BQ674R7 924 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 ZNF324BQ6AW86 544 aaPredicted RBP3.45□□□□□ -1.86
CCDC93-209ENST00000488908 GAS2L3Q86XJ1 694 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 BPIFB1Q8TDL5 484 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 IGFBPL1Q8WX77 278 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 DNASE2BQ8WZ79 361 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 MTFMTQ96DP5 389 aaKnown RBP3.45□□□□□ -1.86
CCDC93-209ENST00000488908 WBP1Q96G27 269 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 SLC13A1Q9BZW2 595 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 USP22Q9UPT9 525 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 TMA7Q9Y2S6 64 aaKnown RBP3.45□□□□□ -1.86
CCDC93-209ENST00000488908 MED16Q9Y2X0 877 aa3.45□□□□□ -1.86
CCDC93-209ENST00000488908 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.45□□□□□ -1.86
CCDC93-209ENST00000488908 TTBK1Q5TCY1 1321 aaPredicted RBP3.44□□□□□ -1.86
CCDC93-209ENST00000488908 IGKV3-20P01619 116 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 FGF2P09038 288 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 PLA2G2AP14555 144 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 CREB1P16220 341 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 ATF7P17544 494 aaPredicted RBP3.44□□□□□ -1.86
CCDC93-209ENST00000488908 CCND1P24385 295 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 PRKAR1BP31321 381 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 BCAT1P54687 386 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 CFHR3Q02985 330 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 MTMR1Q13613 665 aa3.44□□□□□ -1.86
CCDC93-209ENST00000488908 INPP5JQ15735 1006 aaPredicted RBP3.44□□□□□ -1.86
CCDC93-209ENST00000488908 PGS1Q32NB8 556 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms