RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 UBA3Q8TBC4 463 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 CSGALNACT1Q8TDX6 532 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 RSPRY1Q96DX4 576 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 NACA2Q9H009 215 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 SIX2Q9NPC8 291 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 TRPV5Q9NQA5 729 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 ARHGEF3Q9NR81 526 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 GMIPQ9P107 970 aa15.88■□□□□ 0.13
CXCL12-207ENST00000488591 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.88■□□□□ 0.13
CXCL12-207ENST00000488591 PATJQ8NI35 1801 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 CAVIN2O95810 425 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 OAS1P00973 400 aaKnown RBP15.87■□□□□ 0.13
CXCL12-207ENST00000488591 PSEN1P49768 467 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 TUBP50607 506 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 COPB1P53618 953 aaKnown RBP15.87■□□□□ 0.13
CXCL12-207ENST00000488591 PRKCQQ04759 706 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 PDE4CQ08493 712 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 KCNMA1Q12791 1236 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 GPRIN1Q7Z2K8 1008 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 FBXL6Q8N531 539 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 TTC16Q8NEE8 873 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 TFAP2BQ92481 460 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 SHC3Q92529 594 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 SLC22A12Q96S37 553 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 FUCA2Q9BTY2 467 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 LSM14BQ9BX40 385 aaKnown RBP15.87■□□□□ 0.13
CXCL12-207ENST00000488591 LRRC4Q9HBW1 653 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 ARHGAP26Q9UNA1 814 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 CCL26Q9Y258 94 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 ANAPC1Q9H1A4 1944 aa15.87■□□□□ 0.13
CXCL12-207ENST00000488591 LRRC10BA6NIK2 292 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 M0QYV0 167 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 THAP12O43422 761 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 ZDHHC11BP0C7U3 371 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 MBL2P11226 248 aaPredicted RBP15.86■□□□□ 0.13
CXCL12-207ENST00000488591 ZNF18P17022 549 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 GNA15P30679 374 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 TKTL1P51854 596 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 TPM4P67936 248 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 SLC7A9P82251 487 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 PTK2Q05397 1052 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 RAPGEF1Q13905 1077 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 MLF2Q15773 248 aaPredicted RBP15.86■□□□□ 0.13
CXCL12-207ENST00000488591 ZSCAN23Q3MJ62 389 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 KLHDC7AQ5VTJ3 777 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 CCDC186Q7Z3E2 898 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 TADA2BQ86TJ2 420 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 DDX42Q86XP3 938 aaKnown RBP eCLIP15.86■□□□□ 0.13
CXCL12-207ENST00000488591 ARHGAP18Q8N392 663 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 FLCNQ8NFG4 579 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 PCMTD1Q96MG8 357 aaPredicted RBP15.86■□□□□ 0.13
CXCL12-207ENST00000488591 LRRC3BQ96PB8 259 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 RNF38Q9H0F5 515 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 PLCB1Q9NQ66 1216 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 USP3Q9Y6I4 520 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 TRIOO75962 3097 aa15.86■□□□□ 0.13
CXCL12-207ENST00000488591 KRBA1A5PL33 1030 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 LGALS16A8MUM7 142 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 CYP26A1O43174 497 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 OLFM2O95897 454 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 PDGFBP01127 241 aaPredicted RBP15.85■□□□□ 0.13
CXCL12-207ENST00000488591 RALAP11233 206 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 GLULP15104 373 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 TCF3P15923 654 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 PLA2G4AP47712 749 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 CLCN5P51795 746 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 STARD6P59095 220 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 BPIFB4P59827 614 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 UBXN1Q04323 297 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 MTF1Q14872 753 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 RAB41Q5JT25 222 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 DHX40Q8IX18 779 aaKnown RBP15.85■□□□□ 0.13
CXCL12-207ENST00000488591 SIX6OS1Q8N1H7 587 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 SH3RF2Q8TEC5 729 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 ZNF606Q8WXB4 792 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 KCTD13Q8WZ19 329 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 SECISBP2LQ93073 1101 aaKnown RBP15.85■□□□□ 0.13
CXCL12-207ENST00000488591 CDK5RAP1Q96SZ6 601 aaKnown RBP15.85■□□□□ 0.13
CXCL12-207ENST00000488591 HEBP1Q9NRV9 189 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 GKN1Q9NS71 199 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 NAGPAQ9UK23 515 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 DAAM1Q9Y4D1 1078 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 CPQQ9Y646 472 aa15.85■□□□□ 0.13
CXCL12-207ENST00000488591 A0A1W2PQH9 124 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 LEFTY2O00292 366 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 FOXN3O00409 490 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-207ENST00000488591 MAN2B1O00754 1011 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 COCHO43405 550 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 TLR5O60602 858 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 ZBED1O96006 694 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 CALCAP01258 141 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 UCHL3P15374 230 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 ATP5C1P36542 298 aaKnown RBP15.84■□□□□ 0.13
CXCL12-207ENST00000488591 KPNA1P52294 538 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-207ENST00000488591 MLLT6P55198 1093 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-207ENST00000488591 DRAP1Q14919 205 aaPredicted RBP15.84■□□□□ 0.13
CXCL12-207ENST00000488591 PDGFRLQ15198 375 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 MEA1Q16626 185 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 FILIP1LQ4L180 1135 aa15.84■□□□□ 0.13
CXCL12-207ENST00000488591 PKDCCQ504Y2 493 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms