RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 ZNF233A6NK53 670 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.06□□□□□ -0.32
TTC3-221ENST00000488522 F8VP50 259 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 SGK1O00141 431 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 KAT7O95251 611 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 ADH1CP00326 375 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 ANXA13P27216 316 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 GRIK1P39086 918 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 GRIA2P42262 883 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 TNFRSF4P43489 277 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 SEC13P55735 322 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 MAP7D1Q3KQU3 841 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 EOGTQ5NDL2 527 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 SNX30Q5VWJ9 437 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 LMBRD2Q68DH5 695 aaPredicted RBP13.06□□□□□ -0.32
TTC3-221ENST00000488522 RHBDF2Q6PJF5 856 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 LPCAT2Q7L5N7 544 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 PIP4P1Q86T03 277 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 C12orf40Q86WS4 652 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 CBWD2Q8IUF1 395 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 SYT12Q8IV01 421 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 ETFBKMTQ8IXQ9 262 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 ALLCQ8N6M5 410 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 TXNDC5Q8NBS9 432 aaKnown RBP13.06□□□□□ -0.32
TTC3-221ENST00000488522 ZFRQ96KR1 1074 aaKnown RBP13.06□□□□□ -0.32
TTC3-221ENST00000488522 SPACA7Q96KW9 195 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 ELOVL4Q9GZR5 314 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 PCIF1Q9H4Z3 704 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 GDPD2Q9HCC8 539 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 PANK4Q9NVE7 773 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 TBC1D14Q9P2M4 693 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 PCDHA7Q9UN72 937 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 INVSQ9Y283 1065 aa13.06□□□□□ -0.32
TTC3-221ENST00000488522 FAM92AA1XBS5 289 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 EIF3DO15371 548 aaKnown RBP eCLIP13.05□□□□□ -0.32
TTC3-221ENST00000488522 HOXC11O43248 304 aaPredicted RBP13.05□□□□□ -0.32
TTC3-221ENST00000488522 ADAM23O75077 832 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 PRPF6O94906 941 aaKnown RBP13.05□□□□□ -0.32
TTC3-221ENST00000488522 APODP05090 189 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 ADH5P11766 374 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 IDEP14735 1019 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 HOXD13P35453 343 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 STAT6P42226 847 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 DHPSP49366 369 aaPredicted RBP13.05□□□□□ -0.32
TTC3-221ENST00000488522 TUBP50607 506 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 CYP27A1Q02318 531 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 FOXC1Q12948 553 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 TAF10Q12962 218 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 TRIM61Q5EBN2 209 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 MDH1BQ5I0G3 518 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 CNNM4Q6P4Q7 775 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 STXBP4Q6ZWJ1 553 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 TRAPPC11Q7Z392 1133 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 SFTPA1Q8IWL2 248 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 CCDC65Q8IXS2 484 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 CCDC33Q8N5R6 958 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 PDZD8Q8NEN9 1154 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 SLITRK1Q96PX8 696 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 TNMDQ9H2S6 317 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 POLMQ9NP87 494 aaPredicted RBP13.05□□□□□ -0.32
TTC3-221ENST00000488522 IL37Q9NZH6 218 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 HSPBP1Q9NZL4 362 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 MBD1Q9UIS9 605 aaPredicted RBP13.05□□□□□ -0.32
TTC3-221ENST00000488522 R3HCC1Q9Y3T6 440 aaKnown RBP13.05□□□□□ -0.32
TTC3-221ENST00000488522 NEUROG3Q9Y4Z2 214 aa13.05□□□□□ -0.32
TTC3-221ENST00000488522 FREM2Q5SZK8 3169 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 FAM221BA6H8Z2 402 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 KLF8O95600 359 aaPredicted RBP13.04□□□□□ -0.32
TTC3-221ENST00000488522 PDGFRBP09619 1106 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 PTGER3P43115 390 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 SLC6A11P48066 632 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 CACNA2D1P54289 1103 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 SEMA3BQ13214 749 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 BYSLQ13895 437 aaKnown RBP13.04□□□□□ -0.32
TTC3-221ENST00000488522 PSMD6Q15008 389 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 TDRD10Q5VZ19 366 aaKnown RBP13.04□□□□□ -0.32
TTC3-221ENST00000488522 EPM2AIP1Q7L775 607 aaPredicted RBP13.04□□□□□ -0.32
TTC3-221ENST00000488522 GLIS3Q8NEA6 775 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 TTC16Q8NEE8 873 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 PIGKQ92643 395 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 GBP4Q96PP9 640 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 MRPL45Q9BRJ2 306 aaKnown RBP13.04□□□□□ -0.32
TTC3-221ENST00000488522 SCNM1Q9BWG6 230 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 NUSAP1Q9BXS6 441 aaKnown RBP13.04□□□□□ -0.32
TTC3-221ENST00000488522 GZF1Q9H116 711 aaPredicted RBP13.04□□□□□ -0.32
TTC3-221ENST00000488522 VRTNQ9H8Y1 702 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 CD248Q9HCU0 757 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 ARHGEF4Q9NR80 690 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 TMEM74BQ9NUR3 256 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 CFAP97Q9P2B7 532 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 PILRBQ9UKJ0 227 aa13.04□□□□□ -0.32
TTC3-221ENST00000488522 CEP192Q8TEP8 1941 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 GOLGA6L4A6NEF3 574 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 RTN3O95197 1032 aaPredicted RBP13.03□□□□□ -0.32
TTC3-221ENST00000488522 TOP3BO95985 862 aaKnown RBP13.03□□□□□ -0.32
TTC3-221ENST00000488522 CST3P01034 146 aaPredicted RBP13.03□□□□□ -0.32
TTC3-221ENST00000488522 ZDHHC11BP0C7U3 371 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 ENGP17813 658 aa13.03□□□□□ -0.32
TTC3-221ENST00000488522 PTPN1P18031 435 aaKnown RBP13.03□□□□□ -0.32
TTC3-221ENST00000488522 SPINK2P20155 84 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms