RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 PARD6AQ9NPB6 346 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 DMAP1Q9NPF5 467 aaPredicted RBP11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 GMIPQ9P107 970 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 CFAP97Q9P2B7 532 aa11.99□□□□□ -0.49
NIPAL3-207ENST00000488155 ADAMTS9Q9P2N4 1935 aa11.98□□□□□ -0.49
NIPAL3-207ENST00000488155 GOLGA6L4A6NEF3 574 aa11.98□□□□□ -0.49
NIPAL3-207ENST00000488155 IKBKBO14920 756 aa11.98□□□□□ -0.49
NIPAL3-207ENST00000488155 PAPSS2O95340 614 aaPredicted RBP11.98□□□□□ -0.49
NIPAL3-207ENST00000488155 IRF1P10914 325 aa11.98□□□□□ -0.49
NIPAL3-207ENST00000488155 RPL13P26373 211 aaKnown RBP11.98□□□□□ -0.49
NIPAL3-207ENST00000488155 PSMC2P35998 433 aaKnown RBP11.98□□□□□ -0.49
NIPAL3-207ENST00000488155 PPP3CCP48454 512 aa11.98□□□□□ -0.49
NIPAL3-207ENST00000488155 SLC7A9P82251 487 aa11.98□□□□□ -0.49
NIPAL3-207ENST00000488155 INTS8Q75QN2 995 aaKnown RBP11.98□□□□□ -0.49
NIPAL3-207ENST00000488155 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.98□□□□□ -0.49
NIPAL3-207ENST00000488155 GUF1Q8N442 669 aaKnown RBP11.98□□□□□ -0.49
NIPAL3-207ENST00000488155 TMEM174Q8WUU8 243 aa11.98□□□□□ -0.49
NIPAL3-207ENST00000488155 TAF4BQ92750 862 aa11.98□□□□□ -0.49
NIPAL3-207ENST00000488155 DNAH14Q0VDD8 3507 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 TNFRSF10BO14763 440 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 COCHO43405 550 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 ATG13O75143 517 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 OLFM2O95897 454 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 CYP17A1P05093 508 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 TCF3P15923 654 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 PFKLP17858 780 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 OPRD1P41143 372 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 SLC6A11P48066 632 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 PGFP49763 221 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 BECN1Q14457 450 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 DHCR24Q15392 516 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 NFIL3Q16649 462 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 ZNF394Q53GI3 561 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 C2orf27AQ580R0 203 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 HECTD3Q5T447 861 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 LAIR1Q6GTX8 287 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 ISM2Q6H9L7 571 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 CRYBG2Q8N1P7 616 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 PDZD8Q8NEN9 1154 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 WBP2Q969T9 261 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 EXOC4Q96A65 974 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 CYFIP2Q96F07 1278 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 CCDC34Q96HJ3 373 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 IMPG2Q9BZV3 1241 aa11.97□□□□□ -0.49
NIPAL3-207ENST00000488155 AXIN1O15169 862 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 MAPK13O15264 365 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 FAM200BP0CF97 657 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 CCDC192P0DO97 292 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 TGM1P22735 817 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 PRCPP42785 496 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 KDSRQ06136 332 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 DMC1Q14565 340 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 PUM1Q14671 1186 aaKnown RBP eCLIP11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 CCDC6Q16204 474 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 GAB4Q2WGN9 574 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 ZCWPW2Q504Y3 356 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 TCERG1LQ5VWI1 586 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 GPRIN1Q7Z2K8 1008 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 DGLUCYQ7Z3D6 616 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 WDR5BQ86VZ2 330 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 UNC93AQ86WB7 457 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 C12orf40Q86WS4 652 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 TTC30AQ86WT1 665 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 SFTPA1Q8IWL2 248 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 ADGRG2Q8IZP9 1017 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 FMR1NBQ8N0W7 255 aaPredicted RBP11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 CCDC33Q8N5R6 958 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 FAM160A2Q8N612 972 aaPredicted RBP11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 CCDC150Q8NCX0 1101 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 SEMA4DQ92854 862 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 NT5C1AQ9BXI3 368 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 NACA2Q9H009 215 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 TMEM8AQ9HCN3 771 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 ZDHHC4Q9NPG8 344 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 NUDT5Q9UKK9 219 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 SH3BP1Q9Y3L3 701 aa11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.96□□□□□ -0.49
NIPAL3-207ENST00000488155 ASCC3Q8N3C0 2202 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 TRIM49BA6NDI0 452 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 K7EQS6 105 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 SLC9A3R1O14745 358 aaPredicted RBP11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 MDM4O15151 490 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 CETN3O15182 167 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 TBX18O95935 607 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 RETP07949 1114 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 EPB41P11171 864 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 ACO1P21399 889 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 CNR2P34972 360 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 MXI1P50539 228 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 MESP2Q0VG99 397 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 FBXO43Q4G163 708 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 DCAF17Q5H9S7 520 aaPredicted RBP11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 LY6G5CQ5SRR4 150 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 KRT39Q6A163 491 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 RHBDF2Q6PJF5 856 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 CLEC20AQ6ZU45 233 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 KBTBD6Q86V97 674 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 BBS7Q8IWZ6 715 aa11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 GPR161Q8N6U8 529 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-207ENST00000488155 NAT16Q8N8M0 369 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms