RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 PIAS3Q9Y6X2 628 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 KMT2BQ9UMN6 2715 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 KRTAP4-8A0A0G2JLE6 195 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 KLF18A0A0U1RQI7 1052 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 KRTAP9-6A0A140TA67 174 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 PODXLO00592 558 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 PER2O15055 1255 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 NARSO43776 548 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 PCDHGA12O60330 932 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 SLITRK3O94933 977 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 CER1O95813 267 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 LDHAP00338 332 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 GAP43P17677 238 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 PTGS1P23219 599 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 ITPKAP23677 461 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 HOXC13P31276 330 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 MPLP40238 635 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 P2RY2P41231 377 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 OR1G1P47890 313 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 LHX1P48742 406 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 NLRP5P59047 1200 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 NOP14P78316 857 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 PWP1Q13610 501 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 RTP5Q14D33 572 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 EIF4HQ15056 248 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 AASDHQ4L235 1098 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 FAM78AQ5JUQ0 283 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 PERM1Q5SV97 790 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 ATF7IP2Q5U623 682 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 TSHZ3Q63HK5 1081 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 PARM1Q6UWI2 310 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 C8orf86Q6ZUL3 223 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 RUFY3Q7L099 469 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 LPCAT2Q7L5N7 544 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 TMPRSS7Q7RTY8 843 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 IQCHQ86VS3 1027 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 TMPRSS12Q86WS5 348 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 METTL23Q86XA0 190 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 C12orf56Q8IXR9 622 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 FAM217AQ8IXS0 508 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 SHKBP1Q8TBC3 707 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 TBCKQ8TEA7 893 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 WHAMMQ8TF30 809 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 GATAD2BQ8WXI9 593 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 TAF4BQ92750 862 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 HAS1Q92839 578 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 CD101Q93033 1021 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 PMEPA1Q969W9 287 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 ZSCAN31Q96LW9 406 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 SCLT1Q96NL6 688 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 TMEM209Q96SK2 561 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 PKMYT1Q99640 499 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 SEMA3CQ99985 751 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 DPH2Q9BQC3 489 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 EIF2AK1Q9BQI3 630 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 ACBD6Q9BR61 282 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 PYM1Q9BRP8 204 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 NUSAP1Q9BXS6 441 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 KRTAP9-2Q9BYQ4 174 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 TRIM6Q9C030 488 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 NRSN2Q9GZP1 204 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 POLR3FQ9H1D9 316 aaPredicted RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 ACTR10Q9NZ32 417 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 KLHL3Q9UH77 587 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 FBXL5Q9UKA1 691 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 ACSL6Q9UKU0 697 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 ITGA11Q9UKX5 1188 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 CA14Q9ULX7 337 aa2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 NOL7Q9UMY1 257 aaKnown RBP2.94□□□□□ -1.94
DEPDC1-203ENST00000488146 CACNA1AO00555 2505 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 TTC26A0AVF1 554 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 PRAMEF27A3QJZ7 478 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 HEPACAM2A8MVW5 462 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 PIRO00625 290 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 FLRT2O43155 660 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 SLC7A4O43246 635 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 AP5Z1O43299 807 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 RECQL4O94761 1208 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 RTN3O95197 1032 aaPredicted RBP2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 GHRHP01286 108 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 CTSBP07858 339 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 OR52Z1P0C646 297 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 CEBPBP17676 345 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 WARSP23381 471 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 PDIA3P30101 505 aaKnown RBP2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 GYS2P54840 703 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 GPC5P78333 572 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 PCDH1Q08174 1060 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 NFIL3Q16649 462 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 TMEM119Q4V9L6 283 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 WDR44Q5JSH3 913 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 WDR45BQ5MNZ6 344 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 RTP2Q5QGT7 225 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 CENPPQ6IPU0 288 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 FOXR2Q6PJQ5 311 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 TMC5Q6UXY8 1006 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 SV2BQ7L1I2 683 aa2.93□□□□□ -1.94
DEPDC1-203ENST00000488146 BEND5Q7L4P6 421 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms